RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 COL8A1P27658 744 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 DHRS2Q13268 280 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 GAMTQ14353 236 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 GGTA1PQ4G0N0 100 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ARL14EPQ8N8R7 260 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 SLC38A5Q8WUX1 472 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 HSD17B8Q92506 261 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CES1P1Q9UKY3 287 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 HS3ST1O14792 307 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 HMGN2P05204 90 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 CSN3P07498 182 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 MC5RP33032 325 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 EIF1P41567 113 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 OR2K2Q8NGT1 345 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 Q8WTZ3 238 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 PIK3IP1Q96FE7 263 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 TECRQ9NZ01 308 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 RAXQ9Y2V3 346 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 C9orf170A2RU37 121 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 MANSC4A6NHS7 340 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 SPNP16150 400 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 P2RY1P47900 373 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 LINC00303Q3SY05 128 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ABHD17BQ5VST6 288 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 PEX11GQ96HA9 241 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 TXNDC17Q9BRA2 123 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 INTS1Q8N201 2190 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 CST7O76096 145 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 EIF3IQ13347 325 aaKnown RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 PARS2Q7L3T8 475 aaKnown RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 LILRA2Q8N149 483 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 PQLC3Q8N755 202 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 CLEC4CQ8WTT0 213 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 CPPED1Q9BRF8 314 aaPredicted RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 EGLN1Q9GZT9 426 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 ARHGAP23Q9P227 1491 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 ZNF735P0CB33 412 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 FOXB2Q5VYV0 432 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 C9orf62Q8N4C0 152 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 RLN3Q8WXF3 142 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 SLC5A10A0PJK1 596 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 C17orf105B2RV13 164 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 NPIPB8E9PQR5 432 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 NPIPB9F8W1W9 429 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 NPIPB7O75200 414 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 CTAG1AP78358 180 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 YOD1Q5VVQ6 348 aaPredicted RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 Q6ZVU0 165 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 OR8I2Q8N0Y5 310 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 OR2C3Q8N628 320 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 OR10S1Q8NGN2 331 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 OBP2AQ9NY56 170 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 TAS2R4Q9NYW5 299 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 FITM1A5D6W6 292 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 EIF4E2O60573 245 aaKnown RBP7.9□□□□□ -1.14
LIG3-202ENST00000378526 POU2AF1Q16633 256 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 MYO7BQ6PIF6 2116 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 LBX2Q6XYB7 198 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 BATF2Q8N1L9 274 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 KLK6Q92876 244 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 TPSD1Q9BZJ3 242 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 UNC13CQ8NB66 2214 aa7.9□□□□□ -1.14
LIG3-202ENST00000378526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 KBTBD11-OT1A0A1B0GTJ5 212 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 GPX5O75715 221 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 VASPP50552 380 aaPredicted RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 PPP1CAP62136 330 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 MPV17LQ2QL34 196 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 USP50Q70EL3 339 aaPredicted RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 Q7L0L9 218 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 C17orf78Q8N4C9 275 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 OR51B6Q9H340 312 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 ENTPD2Q9Y5L3 495 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 PRRC2BQ5JSZ5 2229 aaKnown RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 J3KTA2 159 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 TMPRSS11DO60235 418 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 GNG7O60262 68 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 WNT11O96014 354 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 RNASE1P07998 156 aaKnown RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 DCTDP32321 178 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 EDDM3BP56851 147 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 ZNF542PQ5EBM4 170 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 TREML2Q5T2D2 321 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 TMEM65Q6PI78 240 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 C16orf82Q7Z2V1 217 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 GLIS1Q8NBF1 620 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.15
LIG3-202ENST00000378526 ASCL3Q9NQ33 180 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 HS3ST3A1Q9Y663 406 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 PCNX2A6NKB5 2137 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 GABRA1P14867 456 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 LMO2P25791 158 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 TRAT1Q6PIZ9 186 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 SPNS3Q6ZMD2 512 aa7.9□□□□□ -1.15
LIG3-202ENST00000378526 OR5R1Q8NH85 324 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms