RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 GABARAPL2P60520 117 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 LMO4P61968 165 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 MED22Q15528 200 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 UBE2V2Q15819 145 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 ZNF404Q494X3 552 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 FAM201AQ5SY85 155 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 HAGHLQ6PII5 290 aaPredicted RBP16.8■□□□□ 0.28
RER1-204ENST00000378518 SERPINA12Q8IW75 414 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 ZFP41Q8N8Y5 198 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 LINC01356Q8N9X3 169 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 NPRL2Q8WTW4 380 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 METTL17Q9H7H0 456 aaPredicted RBP16.8■□□□□ 0.28
RER1-204ENST00000378518 TMEM165Q9HC07 324 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 POLDIP2Q9Y2S7 368 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 SIRT4Q9Y6E7 314 aaPredicted RBP16.8■□□□□ 0.28
RER1-204ENST00000378518 ACANP16112 2415 aa16.8■□□□□ 0.28
RER1-204ENST00000378518 LHBP01229 141 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 ATF1P18846 271 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 PRKACBP22694 351 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 CPT2P23786 658 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 ACSM1Q08AH1 577 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 IRF3Q14653 427 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 SPHARQ15513 63 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 YIF1BQ5BJH7 314 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 OR5D14Q8NGL3 314 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 GHSRQ92847 366 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 SPSB1Q96BD6 273 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 C1orf159Q96HA4 380 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 YTHDF1Q9BYJ9 559 aaKnown RBP16.79■□□□□ 0.28
RER1-204ENST00000378518 ZCCHC4Q9H5U6 513 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 PATZ1Q9HBE1 687 aaKnown RBP16.79■□□□□ 0.28
RER1-204ENST00000378518 MIOXQ9UGB7 285 aa16.79■□□□□ 0.28
RER1-204ENST00000378518 PNMA8CA0A1B0GUJ8 204 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 CEACAM18A8MTB9 384 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 SRRM5B3KS81 715 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 B4DSR2 109 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 C3orf80F5H4A9 247 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 J3QT63 122 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 PLPP2O43688 288 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 RPS2P15880 293 aaKnown RBP16.78■□□□□ 0.28
RER1-204ENST00000378518 EGR1P18146 543 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 CELP19835 753 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 AZGP1P25311 298 aaKnown RBP16.78■□□□□ 0.28
RER1-204ENST00000378518 SOX2P48431 317 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 ATP1B3P54709 279 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 KRTAP1-1Q07627 177 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 SFRP4Q6FHJ7 346 aaPredicted RBP16.78■□□□□ 0.28
RER1-204ENST00000378518 FAM166AQ6J272 317 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 DCDC5Q6ZRR9 648 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 LHFPL2Q6ZUX7 228 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 NLRC3Q7RTR2 1065 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 PARP16Q8N5Y8 322 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 C19orf18Q8NEA5 215 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 DNAAF1Q8NEP3 725 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 OR13C9Q8NGT0 318 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 AQP3Q92482 292 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 RGP1Q92546 391 aaPredicted RBP16.78■□□□□ 0.28
RER1-204ENST00000378518 MSI2Q96DH6 328 aaKnown RBP16.78■□□□□ 0.28
RER1-204ENST00000378518 OPALINQ96PE5 141 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 TMEM246Q9BRR3 403 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 DNAJB11Q9UBS4 358 aa16.78■□□□□ 0.28
RER1-204ENST00000378518 FAM157AC9JC47 383 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 NDUFA2O43678 99 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 MRPS14O60783 128 aaKnown RBP16.77■□□□□ 0.28
RER1-204ENST00000378518 TGFAP01135 160 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 CD1AP06126 327 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 MUC1P15941 1255 aaPredicted RBP16.77■□□□□ 0.28
RER1-204ENST00000378518 GLRA1P23415 457 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 RBP2P50120 134 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 MICBQ29980 383 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 TEX36Q5VZQ5 186 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 OR51F2Q8NH61 342 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 THRSPQ92748 146 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 TMEM106AQ96A25 262 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 PGLYRP3Q96LB9 341 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 OR5M11Q96RB7 305 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 PKIBQ9C010 78 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 YAE1D1Q9NRH1 226 aa16.77■□□□□ 0.28
RER1-204ENST00000378518 LSM2Q9Y333 95 aaKnown RBP16.77■□□□□ 0.28
RER1-204ENST00000378518 AKR7A2O43488 359 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 SULT1B1O43704 296 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 RHBDL1O75783 438 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 TBCEQ15813 527 aaPredicted RBP16.76■□□□□ 0.27
RER1-204ENST00000378518 Q499Y3 187 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 ESCO2Q56NI9 601 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 Q71RC1 249 aaPredicted RBP16.76■□□□□ 0.27
RER1-204ENST00000378518 GLCCI1Q86VQ1 547 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 OR8B3Q8NGG8 313 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 UFD1Q92890 307 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 C12orf43Q96C57 262 aaKnown RBP16.76■□□□□ 0.27
RER1-204ENST00000378518 NEIL1Q96FI4 390 aaPredicted RBP16.76■□□□□ 0.27
RER1-204ENST00000378518 CPNE2Q96FN4 548 aaPredicted RBP16.76■□□□□ 0.27
RER1-204ENST00000378518 OR8B2Q96RD0 313 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 KCNS2Q9ULS6 477 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 ABCA1O95477 2261 aa16.76■□□□□ 0.27
RER1-204ENST00000378518 ABCA2Q9BZC7 2435 aa16.75■□□□□ 0.27
RER1-204ENST00000378518 IGKV1-9A0A0C4DH69 117 aa16.75■□□□□ 0.27
RER1-204ENST00000378518 F5H0A9 414 aaPredicted RBP16.75■□□□□ 0.27
RER1-204ENST00000378518 MAGEB3O15480 346 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms