RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C4orf47A7E2U8 309 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 TMPRSS11DO60235 418 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 CLEC3AO75596 197 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 CCL5P13501 91 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF823P16415 610 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 AMTP48728 403 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 STUMQ69YW2 141 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 OR52E2Q8NGJ4 325 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 HCFC1R1Q9NWW0 138 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 P4HTMQ9NXG6 502 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 CDC42EP3Q9UKI2 254 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 PMCHP20382 165 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 RABIFP47224 123 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 MS4A6EQ96DS6 147 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 NEURL3Q96EH8 262 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 INSL6Q9Y581 213 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 QSER1Q2KHR3 1735 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 OMGP23515 440 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ENTPD8Q5MY95 495 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 CLEC18BQ6UXF7 455 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 GNPNAT1Q96EK6 184 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 MRGPRX3Q96LB0 322 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 KCNS2Q9ULS6 477 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ARL2-SNX15V9GYD0 113 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 FRS3O43559 492 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ADRA2AP08913 450 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 CTSAP10619 480 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 LIM2P55344 173 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 OR4K13Q8NH42 304 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 FITM1A5D6W6 292 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 F8VVB4 439 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 F8VWA3 439 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 PSG1P11464 419 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 CRISP2P16562 243 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 CSNK1A1P48729 337 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ARRB1P49407 418 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 NPY4RP50391 375 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 PPP1CBP62140 327 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 PAX2Q02962 417 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 MFGE8Q08431 387 aaPredicted RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 DEFB134Q4QY38 66 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM128Q5BJH2 165 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 PARS2Q7L3T8 475 aaKnown RBP10.54□□□□□ -0.72
NPHP4-202ENST00000378161 ACOT4Q8N9L9 421 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 C17orf47Q8NEP4 570 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 CXorf36Q9H7Y0 433 aa10.54□□□□□ -0.72
NPHP4-202ENST00000378161 TRBV5-4A0A0C4DH59 114 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 MDFIC2A0A1B0GVS7 189 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 FGF17O60258 216 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 PRPH2P23942 346 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 GABRA3P34903 492 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 PPICP45877 212 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 FZD2Q14332 565 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF776Q68DI1 518 aaPredicted RBP10.53□□□□□ -0.72
NPHP4-202ENST00000378161 ERASQ7Z444 233 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 RHBDD1Q8TEB9 315 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 CHST8Q9H2A9 424 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 URB1O60287 2271 aaKnown RBP10.53□□□□□ -0.72
NPHP4-202ENST00000378161 FER1L6Q2WGJ9 1857 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 CLEC18AA5D8T8 446 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 SLC2A10O95528 541 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 THBS2P35442 1172 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 FAM71E1Q6IPT2 247 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 WFDC8Q8IUA0 241 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 LYG1Q8N1E2 194 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 FAM89BQ8N5H3 189 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 CLEC18CQ8NCF0 446 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 CPT1CQ8TCG5 803 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
NPHP4-202ENST00000378161 OSGIN2Q9Y236 505 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 SFTPDP35247 375 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 HNRNPA1L2Q32P51 320 aaKnown RBP10.53□□□□□ -0.72
NPHP4-202ENST00000378161 HIKESHIQ53FT3 197 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 C12orf54Q6X4T0 127 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 SLC25A42Q86VD7 318 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 ALG12Q9BV10 488 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 ABHD6Q9BV23 337 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 A4GALTQ9NPC4 353 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 NTNG1Q9Y2I2 539 aa10.53□□□□□ -0.72
NPHP4-202ENST00000378161 PTPRFP10586 1907 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 DVL2O14641 736 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 PPP1R3DO95685 299 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 PF4V1P10720 104 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 RAB9AP51151 201 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 TLE1Q04724 770 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 ZP2Q05996 745 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 MRPL58Q14197 206 aaKnown RBP10.52□□□□□ -0.72
NPHP4-202ENST00000378161 BSXQ3C1V8 233 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms