RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 F6UZH7 168 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 GLI4P10075 376 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 NTF3P20783 257 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 CD300CQ08708 224 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 SSX8Q7RTT4 187 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 C17orf78Q8N4C9 275 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 SLC35E1Q96K37 410 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 TOLLIPQ9H0E2 274 aa9.68□□□□□ -0.86
HIF3A-205ENST00000377670 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
HIF3A-205ENST00000377670 A0A1B0GTH9 108 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 NKX2-1P43699 371 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 TPBGQ13641 420 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ACKR1Q16570 336 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 PLAC9Q5JTB6 97 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 PRAMEF5Q5TYX0 476 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 PRAMEF6Q5VXH4 476 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 LCN15Q6UWW0 184 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 OR6K3Q8NGY3 331 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 TM4SF19Q96DZ7 209 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ADAT1Q9BUB4 502 aaKnown RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 MED29Q9NX70 200 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ING1Q9UK53 422 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 SCN2AQ99250 2005 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ST8SIA3O43173 380 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ANGPTL7O43827 346 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ABCD3P28288 659 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CSF2RBP32927 897 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 GPR6P46095 362 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF133P52736 654 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ATP5J2P56134 94 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 SLC23A3Q6PIS1 610 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 OR10AD1Q8NGE0 317 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 A0A1W2PRD5 423 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 A0A1W2PRF3 423 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 A0A1W2PRM7 423 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 NRASP01111 189 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 RPL12P30050 165 aaKnown RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 DCTDP32321 178 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CSN1S1P47710 185 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 LHFPL2Q6ZUX7 228 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 BAP18Q8IXM2 172 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 SLAMF6Q96DU3 332 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CD3DP04234 171 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 PRPH2P23942 346 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CCDC190Q86UF4 302 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 AKR7LQ8NHP1 331 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 RAXQ9Y2V3 346 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 KIR2DS1A0A191URI9 304 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 BCL2L11O43521 198 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 GREM1O60565 184 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 OR10J4P0C629 311 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 KIR2DS4P43632 304 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 DIO1P49895 249 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 KIR2DS1Q14954 304 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CORO6Q6QEF8 472 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 SSX7Q7RTT5 188 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 RDH5Q92781 318 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 COX14Q96I36 57 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 TMEM208Q9BTX3 173 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 TINAGL1Q9GZM7 467 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 CYSLTR2Q9NS75 346 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
HIF3A-205ENST00000377670 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
HIF3A-205ENST00000377670 KIF13BQ9NQT8 1826 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SNRPGP15A8MWD9 76 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 DNASE2O00115 360 aaPredicted RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 LRP3O75074 770 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SFTA3P0C7M3 94 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR8U8P0C7N1 319 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 PI3P19957 117 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF90Q03938 601 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SIGLECL1Q8N7X8 197 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR4F5Q8NH21 305 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR4F4Q96R69 305 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF2Q9BSG1 426 aaPredicted RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 MS4A5Q9H3V2 200 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 AQP7O14520 342 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 HIST1H1CP16403 213 aaKnown RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 PRRX1P54821 245 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 FZD5Q13467 585 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 CXorf67Q86X51 503 aaPredicted RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 C10orf111Q8N326 155 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR13D1Q8NGV5 346 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms