RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DNAJC9-AS1A6NH13 148 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 SYT7O43581 403 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ENTPD6O75354 484 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 FCN3O75636 299 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 RHBDL1O75783 438 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L2P0CJ85 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L3P0CJ86 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L4P0CJ87 422 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L5P0CJ88 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L6P0CJ89 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L7P0CJ90 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 MMP9P14780 707 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ELF3P78545 371 aaPredicted RBP13.92□□□□□ -0.18
HMGN4-201ENST00000377575 IL13RA1P78552 427 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 BAMBIQ13145 260 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 PDCD1Q15116 288 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 OCLNQ16625 522 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 HAGHLQ6PII5 290 aaPredicted RBP13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4L9Q6RFH8 374 aaPredicted RBP13.92□□□□□ -0.18
HMGN4-201ENST00000377575 Q6ZSR3 168 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF573Q86YE8 665 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 PQLC1Q8N2U9 271 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 OR5T2Q8NGG2 359 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ANGPTL6Q8NI99 470 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 AQP3Q92482 292 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 RORBQ92753 470 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 GCDHQ92947 438 aaPredicted RBP13.92□□□□□ -0.18
HMGN4-201ENST00000377575 TMIGD2Q96BF3 282 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 RNFT2Q96EX2 444 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 MED30Q96HR3 178 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DMRTB1Q96MA1 342 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF48Q96MX3 618 aaPredicted RBP13.92□□□□□ -0.18
HMGN4-201ENST00000377575 ADI1Q9BV57 179 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 GPR173Q9NS66 373 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 DUX4Q9UBX2 424 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 POLDIP2Q9Y2S7 368 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 PCDHGB1Q9Y5G3 927 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 OR2AT4A6NND4 320 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 E9PQ18 207 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 J3QT63 122 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 MPZL2O60487 215 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 SFTPBP07988 381 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 UBCP0CG48 685 aaKnown RBP13.91□□□□□ -0.18
HMGN4-201ENST00000377575 PRTN3P24158 256 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 HAAOP46952 286 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 TGM4P49221 684 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF85Q03923 595 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 ODF4Q2M2E3 257 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 SMIM21Q3B7S5 101 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 DMRTC1Q5HYR2 192 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 BRD3OSQ6XYD6 125 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF788Q6ZQV5 615 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 ZBTB49Q6ZSB9 765 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 CMTM4Q8IZR5 234 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 STMN2Q93045 179 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 UBE2FQ969M7 185 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
HMGN4-201ENST00000377575 GAFA1Q96PS6 74 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 TBX15Q96SF7 602 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 MBOAT4Q96T53 435 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 MYCBPQ99417 103 aaPredicted RBP13.91□□□□□ -0.18
HMGN4-201ENST00000377575 SIRPDQ9H106 197 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 CNTD2Q9H8S5 307 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 ACOXLQ9NUZ1 547 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 RASL12Q9NYN1 266 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 SLC25A10Q9UBX3 287 aaPredicted RBP13.91□□□□□ -0.18
HMGN4-201ENST00000377575 KPTNQ9Y664 436 aa13.91□□□□□ -0.18
HMGN4-201ENST00000377575 FBN3Q75N90 2809 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 DAPL1A0PJW8 107 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 ANKRD61A6NGH8 418 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 SIGLEC5O15389 551 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 GATBO75879 557 aaKnown RBP13.9□□□□□ -0.18
HMGN4-201ENST00000377575 GABRA2P47869 451 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 COMPP49747 757 aaPredicted RBP13.9□□□□□ -0.18
HMGN4-201ENST00000377575 ISL1P61371 349 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 CDONQ4KMG0 1287 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 TP53I3Q53FA7 332 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 KCTD20Q7Z5Y7 419 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 KIR3DL3Q8N743 410 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 GATAD2BQ8WXI9 593 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 H1FXQ92522 213 aaKnown RBP13.9□□□□□ -0.18
HMGN4-201ENST00000377575 SLC25A28Q96A46 364 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 ONECUT1Q9UBC0 465 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 SLC7A11Q9UPY5 501 aa13.9□□□□□ -0.18
HMGN4-201ENST00000377575 LOC107986453A0A1B0GWG9 222 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 PQLC2LA1A4F0 135 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 TMEM89A2RUT3 159 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 A6NIN4 97 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 CLDN34H7C241 214 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 ACAA1P09110 424 aaPredicted RBP13.89□□□□□ -0.19
HMGN4-201ENST00000377575 SELLP14151 372 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 AMY2BP19961 511 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 CAV3P56539 151 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 ARF6P62330 175 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 ACTA2P62736 377 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 ACTG2P63267 376 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 ZSCAN26Q16670 478 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms