RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ZAR1LA6NP61 321 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 PRR32B1ATL7 298 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 ZNF732B4DXR9 585 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 RNASEK-C17orf49H0YIS7 233 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 PSMD9O00233 223 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 NPFFO15130 113 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 SIGLEC5O15389 551 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 MITFO75030 526 aaPredicted RBP17.27■□□□□ 0.36
VSX1-201ENST00000376707 IGLV3-1P01715 115 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 GABRA2P47869 451 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 GNG3P63215 75 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 CEP78Q5JTW2 689 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 AADACL4Q5VUY2 407 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 C12orf73Q69YU5 71 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 MEPCEQ7L2J0 689 aaKnown RBP17.27■□□□□ 0.36
VSX1-201ENST00000376707 THAP5Q7Z6K1 395 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 ZDHHC13Q8IUH4 622 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 LINC01006Q8NI28 216 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 OR8B4Q96RC9 309 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 CNN2Q99439 309 aaKnown RBP17.27■□□□□ 0.36
VSX1-201ENST00000376707 ZNRD1Q9P1U0 126 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 COPS3Q9UNS2 423 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 SLC22A31A6NKX4 558 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 RHBDL1O75783 438 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 PAHP00439 452 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 ACAA1P09110 424 aaPredicted RBP17.26■□□□□ 0.35
VSX1-201ENST00000376707 FCGR1AP12314 374 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 DLX1P56177 255 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 CAV3P56539 151 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 DEFA6Q01524 100 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 KLRD1Q13241 179 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 TAF9Q16594 264 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 CEACAM21Q3KPI0 293 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 C1orf146Q5VVC0 180 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 NXNL2Q5VZ03 156 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 C1orf122Q6ZSJ8 110 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 TMEM163Q8TC26 289 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 PBOV1Q9GZY1 135 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 OR51I2Q9H344 312 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 ENOPH1Q9UHY7 261 aa17.26■□□□□ 0.35
VSX1-201ENST00000376707 M0QZ24 198 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 M0R1W7 72 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 TIMM23O14925 209 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 RIPPLY1Q0D2K3 151 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 BLMHQ13867 455 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 ZNF829Q3KNS6 432 aaPredicted RBP17.25■□□□□ 0.35
VSX1-201ENST00000376707 NCR3LG1Q68D85 454 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 BCDIN3DQ7Z5W3 292 aaKnown RBP17.25■□□□□ 0.35
VSX1-201ENST00000376707 TCEANCQ8N8B7 351 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 TMEM185AQ8NFB2 350 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 ZNF671Q8TAW3 534 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 OR51E1Q8TCB6 317 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 MNTQ99583 582 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 METTL8Q9H825 291 aaKnown RBP17.25■□□□□ 0.35
VSX1-201ENST00000376707 ADGRL4Q9HBW9 690 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 NUFIP1Q9UHK0 495 aaKnown RBP17.25■□□□□ 0.35
VSX1-201ENST00000376707 VPREB3Q9UKI3 123 aa17.25■□□□□ 0.35
VSX1-201ENST00000376707 IGKV1D-17A0A075B6S4 117 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 MEIOCA2RUB1 952 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 OR5B21A6NL26 309 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 M0R129 80 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 SRSF10O75494 262 aaKnown RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 SAA4P35542 130 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 RIDAP52758 137 aaKnown RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 DMRTC1Q5HYR2 192 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 ZBTB37Q5TC79 503 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 PLCXD3Q63HM9 321 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 DHRS7BQ6IAN0 325 aaPredicted RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 MOB3CQ70IA8 216 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 ZSCAN4Q8NAM6 433 aaPredicted RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 OR5A2Q8NGI9 324 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 TNFRSF14Q92956 283 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 TTTY10Q9BZA0 68 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 GPR84Q9NQS5 396 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 H2AFY2Q9P0M6 372 aaPredicted RBP17.24■□□□□ 0.35
VSX1-201ENST00000376707 IKZF2Q9UKS7 526 aa17.24■□□□□ 0.35
VSX1-201ENST00000376707 PSG2P11465 335 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 FAHP16930 419 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 UBE2E1P51965 193 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 KRTAP10-3P60369 221 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 OCLNQ16625 522 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 MIDNQ504T8 468 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 HAGHLQ6PII5 290 aaPredicted RBP17.23■□□□□ 0.35
VSX1-201ENST00000376707 Q6ZSV7 163 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 AMIGO2Q86SJ2 522 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 PNKDQ8N490 385 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 ZNRF1Q8ND25 227 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 AQP3Q92482 292 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 CIB1Q99828 191 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 ELL3Q9HB65 397 aaPredicted RBP17.23■□□□□ 0.35
VSX1-201ENST00000376707 CLN6Q9NWW5 311 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 ENPP5Q9UJA9 477 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 GTF2A1LQ9UNN4 478 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 PIGLQ9Y2B2 252 aa17.23■□□□□ 0.35
VSX1-201ENST00000376707 H0YAE9 185 aa17.22■□□□□ 0.35
VSX1-201ENST00000376707 CLPXO76031 633 aa17.22■□□□□ 0.35
VSX1-201ENST00000376707 CAPZA1P52907 286 aa17.22■□□□□ 0.35
VSX1-201ENST00000376707 PROK1P58294 105 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms