RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 TMED6Q8WW62 240 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 PHYHIPLQ96FC7 376 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 RSRP1Q9BUV0 290 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 DEPPQ9NTK1 212 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 FOXD3Q9UJU5 478 aaPredicted RBP12.25□□□□□ -0.45
MSH5-202ENST00000375740 WDFY4Q6ZS81 3184 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ZNF736B4DX44 427 aaPredicted RBP12.25□□□□□ -0.45
MSH5-202ENST00000375740 UBE2CO00762 179 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 HTR3BO95264 441 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 AMY2AP04746 511 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ZNF735P0CB33 412 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
MSH5-202ENST00000375740 CARD18P57730 90 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 RAB5BP61020 215 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 RSPO1Q2MKA7 263 aaPredicted RBP12.25□□□□□ -0.45
MSH5-202ENST00000375740 C9orf152Q5JTZ5 239 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 C20orf196Q8IYI0 205 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ZNF101Q8IZC7 436 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 OR4S1Q8NGB4 309 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 LYZL4Q96KX0 146 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ULBP2Q9BZM5 246 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 LOC100509620A0A075B734 347 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 LRRC3CA6NJW4 275 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 TMEM14DPA8MWL7 114 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CSN2P05814 226 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 HEXAP06865 529 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CD79AP11912 226 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 AVPR2P30518 371 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 NTF4P34130 210 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 DMRTC1Q5HYR2 192 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 WIPI1Q5MNZ9 446 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 GGNQ86UU5 652 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 PSMF1Q92530 271 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 C14orf79Q96F83 325 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 LIN37Q96GY3 246 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 SF3B5Q9BWJ5 86 aaKnown RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 MRPS28Q9Y2Q9 187 aaKnown RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 CD74P04233 296 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 S100A8P05109 93 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 S100A6P06703 90 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 HCKP08631 526 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 PGAM2P15259 253 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 OR3A4PP47883 348 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 SLC6A9P48067 706 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CYB561P49447 251 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 ZNF84P51523 738 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 HIST1H3AP68431 136 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 MST1LQ2TV78 715 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 HIST2H3PS2Q5TEC6 136 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 ZNF584Q8IVC4 421 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 BPIFB2Q8N4F0 458 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 ROBO4Q8WZ75 1007 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 MICU1Q9BPX6 476 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 SEC11CQ9BY50 192 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 COMMD9Q9P000 198 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 FOXJ2Q9P0K8 574 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 MBD2Q9UBB5 411 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 FBLN5Q9UBX5 448 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 A0A1W2PNU3 283 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 PINLYPA6NC86 204 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CXCL13O43927 109 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 SLC25A4P12235 298 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CD59P13987 128 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 MUC1P15941 1255 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 GNB3P16520 340 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 CD34P28906 385 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 RTN4RL2Q86UN3 420 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 GVQW1Q8N7I0 195 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 THOC3Q96J01 351 aaKnown RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 SLC6A7Q99884 636 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 NICN1Q9BSH3 213 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 ALX4Q9H161 411 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 HRH4Q9H3N8 390 aa12.24□□□□□ -0.45
MSH5-202ENST00000375740 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
MSH5-202ENST00000375740 C9JQL5 133 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 DNPH1O43598 174 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 LY86O95711 162 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 MELTFP08582 738 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SELLP14151 372 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 S100PP25815 95 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 F2RL1P55085 397 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 RSPO4Q2I0M5 234 aaPredicted RBP12.23□□□□□ -0.45
MSH5-202ENST00000375740 SLC22A6Q4U2R8 563 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 DTX1Q86Y01 620 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 TMEM104Q8NE00 496 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 ARL11Q969Q4 196 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms