RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TMPRSS9Q7Z410 1059 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ERGIC1Q969X5 290 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 URM1Q9BTM9 101 aaKnown RBP12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 PARP11Q9NR21 331 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 RPH3AQ9Y2J0 694 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 AMDHD2Q9Y303 409 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 FER1L5A0AVI2 2057 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 CACNA1HO95180 2353 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ADAMTS9Q9P2N4 1935 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 LILRA5A6NI73 299 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 NME2P1O60361 137 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 S100A6P06703 90 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 SERPINA2P20848 420 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 FHITP49789 147 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 CHRFAM7AQ494W8 412 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 DTX1Q86Y01 620 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 DDIT4LQ96D03 193 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 HDHD3Q9BSH5 251 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 RSRP1Q9BUV0 290 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 FIGNL2A6NMB9 653 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 IFNA2P01563 188 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 FABP1P07148 127 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 KLK2P20151 261 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 RBMXP38159 391 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 GABREP78334 506 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 C17orf67Q0P5P2 114 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 MYBPHQ13203 477 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 KRBOX4Q5JUW0 171 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 CRIP3Q6Q6R5 217 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 EMG1Q92979 244 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 MRPL24Q96A35 216 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ZDHHC12Q96GR4 267 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 OR5B2Q96R09 309 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 PECRQ9BY49 303 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 ELL3Q9HB65 397 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 KLHL13Q9P2N7 655 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 VSTM2BA6NLU5 285 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 STMND1H3BQB6 276 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 RAMP1O60894 148 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 KISS1Q15726 138 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 AWAT1Q58HT5 328 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 THEM4Q5T1C6 240 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 hCG_1809904A0A1W2PP81 198 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PR64 198 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PRV1 198 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 DHRS7CA6NNS2 312 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 TAS2R46P59540 309 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 FABP9Q0Z7S8 132 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 SP6Q3SY56 376 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 MIDNQ504T8 468 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 OR9K2Q8NGE7 335 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 FNDC9Q8TBE3 224 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 RHBDD1Q8TEB9 315 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 PRRX2Q99811 253 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF2Q9BSG1 426 aaPredicted RBP12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 C1orf123Q9NWV4 160 aa12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 MCTS1Q9ULC4 181 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-202ENST00000375692 NPIPB13A6NJU9 1138 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 NPIPB4C9JG80 1138 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 M0R036 132 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 DEDDO75618 318 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 C1QL1O75973 258 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 TSPAN15O95858 294 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 SP9P0CG40 484 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 GLI4P10075 376 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 THBS4P35443 961 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 ZNF616Q08AN1 781 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 NCOA6Q14686 2063 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 GGNBP1Q5YKI7 109 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 PPP1R3BQ86XI6 285 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 UEVLDQ8IX04 471 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 OR6S1Q8NH40 331 aa12.37□□□□□ -0.43
CLCNKA-202ENST00000375692 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms