RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
SDHB-201ENST00000375499 ENPP5Q9UJA9 477 aa12.88□□□□□ -0.35
SDHB-201ENST00000375499 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
SDHB-201ENST00000375499 METTL15A6NJ78 407 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 J3QRE1 110 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 SYNGR1O43759 233 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 NRASP01111 189 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 CCL1P22362 96 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 KIR3DL2P43630 455 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 TGM4P49221 684 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 DLX1P56177 255 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 SNRPGP62308 76 aaKnown RBP12.87□□□□□ -0.35
SDHB-201ENST00000375499 TMED1Q13445 227 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 DGUOKQ16854 277 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 ZBTB37Q5TC79 503 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
SDHB-201ENST00000375499 C9orf139Q6ZV77 190 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
SDHB-201ENST00000375499 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
SDHB-201ENST00000375499 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 DNAJB11Q9UBS4 358 aa12.87□□□□□ -0.35
SDHB-201ENST00000375499 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
SDHB-201ENST00000375499 IGKV1D-17A0A075B6S4 117 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 OR5B21A6NL26 309 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 GLRA1P23415 457 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 MTNR1AP48039 350 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ARF6P62330 175 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
SDHB-201ENST00000375499 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
SDHB-201ENST00000375499 SLC25A30Q5SVS4 291 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 CLVS2Q5SYC1 327 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ATPAF1Q5TC12 328 aaPredicted RBP12.86□□□□□ -0.35
SDHB-201ENST00000375499 CD276Q5ZPR3 534 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ZNF788Q6ZQV5 615 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
SDHB-201ENST00000375499 RFKQ969G6 155 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 HIST1H2AAQ96QV6 131 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ELL3Q9HB65 397 aaPredicted RBP12.86□□□□□ -0.35
SDHB-201ENST00000375499 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 ORC6Q9Y5N6 252 aa12.86□□□□□ -0.35
SDHB-201ENST00000375499 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 MTRF1O75570 445 aaKnown RBP12.85□□□□□ -0.35
SDHB-201ENST00000375499 SULT1C4O75897 302 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 TOX4O94842 621 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 PSG2P11465 335 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 OCLNQ16625 522 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 RDH10Q8IZV5 341 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 PNLDC1Q8NA58 520 aaKnown RBP12.85□□□□□ -0.35
SDHB-201ENST00000375499 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.85□□□□□ -0.35
SDHB-201ENST00000375499 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.85□□□□□ -0.35
SDHB-201ENST00000375499 MAB21L2Q9Y586 359 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 GMPPBQ9Y5P6 360 aa12.85□□□□□ -0.35
SDHB-201ENST00000375499 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 LOC107986453A0A1B0GWG9 222 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 OR2AT4A6NND4 320 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 DLGAP1O14490 977 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 SIGLEC5O15389 551 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 HAAOP46952 286 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
SDHB-201ENST00000375499 OR12D2P58182 307 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 NANOS3P60323 173 aaKnown RBP12.84□□□□□ -0.35
SDHB-201ENST00000375499 ZNF91Q05481 1191 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 BAMBIQ13145 260 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 ACP7Q6ZNF0 438 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 CALHM1Q8IU99 346 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 PDZD9Q8IXQ8 264 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
SDHB-201ENST00000375499 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 ITFG2Q969R8 447 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 LGALS12Q96DT0 336 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 DCTN5Q9BTE1 182 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
SDHB-201ENST00000375499 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 NKX6-3A6NJ46 265 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 DHRS7CA6NNS2 312 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 J3QT63 122 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 SYT7O43581 403 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 NDUFB3O43676 98 aa12.83□□□□□ -0.36
SDHB-201ENST00000375499 ECDO95905 644 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms