RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OR4S1Q8NGB4 309 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR10K1Q8NGX5 313 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OCSTAMPQ9BR26 566 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF222Q9UK12 451 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SERPINE3A8MV23 424 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 AHRRA9YTQ3 701 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RAD51DO75771 328 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CCNOP22674 350 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TGFBR3Q03167 851 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ACSF3Q4G176 576 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ACTBL2Q562R1 376 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR2A2Q6IF42 318 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MOB3CQ70IA8 216 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CSNK2A3Q8NEV1 391 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR56B2PQ8NGI1 322 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZFAND1Q8TCF1 268 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 BOD1Q96IK1 185 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SLC6A7Q99884 636 aa15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ELL3Q9HB65 397 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB1-201ENST00000374943 J3QW42 95 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RGS13O14921 159 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CST4P01036 141 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RLN1P04808 185 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CCL2P13500 99 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IGHV1-2P23083 117 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 BLVRBP30043 206 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IFITM2Q01629 132 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CDK10Q15131 360 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RSU1Q15404 277 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 Q6ZT83 130 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MRPL21Q7Z2W9 205 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MDP1Q86V88 176 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR13C8Q8NGS7 320 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR6K3Q8NGY3 331 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CAPSLQ8WWF8 208 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PIGCQ92535 297 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HYLS1Q96M11 299 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PECRQ9BY49 303 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SSUH2Q9Y2M2 353 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 STARD10Q9Y365 291 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 LOC400499M0QZD8 3231 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TMEM82A0PJX8 343 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FAM172BPA6NC97 362 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FABP7O15540 132 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 AKR7A2O43488 359 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HOXB1P14653 301 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR52W1Q6IF63 320 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RPUSD3Q6P087 351 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GCNT2Q8N0V5 402 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 C9orf106Q8NAJ2 232 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZSCAN4Q8NAM6 433 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CCDC107Q8WV48 283 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SNAPC3Q92966 411 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MRPS24Q96EL2 167 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF436Q9C0F3 470 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RANBP3Q9H6Z4 567 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF69Q9UC07 566 aa15.54■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SPRY1O43609 319 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CSTBP04080 98 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 COX5AP20674 150 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HRH1P35367 487 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 WNT5AP41221 380 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 KIR2DL2P43627 348 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PDZK1IP1Q13113 114 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 VAX1Q5SQQ9 334 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 NSUN5P2Q63ZY6 315 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 INTS1Q8N201 2190 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FTMTQ8N4E7 242 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SLC30A7Q8NEW0 376 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR5M9Q8NGP3 310 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 POM121Q96HA1 1249 aa15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 EIF3KQ9UBQ5 218 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB1-201ENST00000374943 UBE2QL1A1L167 161 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF850A8MQ14 1090 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SMLR1H3BR10 107 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ANGPTL7O43827 346 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HTR3BO95264 441 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF14P17017 642 aaPredicted RBP15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ARFRP1Q13795 201 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ATPAF1Q5TC12 328 aaPredicted RBP15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HOGA1Q86XE5 327 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZDHHC22Q8N966 263 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 C1orf162Q8NEQ5 155 aaPredicted RBP15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR5L1Q8NGL2 311 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR4K15Q8NH41 348 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FBXW5Q969U6 566 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 WBP1Q96G27 269 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 DLL4Q9NR61 685 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PCDHB16Q9NRJ7 776 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GPR160Q9UJ42 338 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HSF4Q9ULV5 492 aa15.52■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IGKV1-12A0A0C4DH73 117 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PQLC2LA1A4F0 135 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 NGFP01138 241 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 IGKV1D-12P01611 117 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PDGFAP04085 211 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CXADRP78310 365 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PRDX4Q13162 271 aa15.51■□□□□ 0.07
HLA-DQB1-201ENST00000374943 SF3B4Q15427 424 aaKnown RBP eCLIP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms