RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 LIME1Q9H400 295 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 CRLF2Q9HC73 371 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 IGKV1-27A0A075B6S5 117 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 CEACAM18A8MTB9 384 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 GLI4P10075 376 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 CTSSP25774 331 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 MTCP1P56278 107 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 DSCR4P56555 118 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 ACTBL2Q562R1 376 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 RPS19BP1Q86WX3 136 aaKnown RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 MAML2Q8IZL2 1156 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 FAAP24Q9BTP7 215 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 WDR54Q9H977 334 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 ZC4H2Q9NQZ6 224 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 PLEKHJ1Q9NW61 149 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 NCOR1O75376 2440 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 CCDC187A0A096LP49 1063 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 TRBV6-7A0A0A0MS04 114 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 A0A0U1RQV5 110 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 ABCD4O14678 606 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 RFPL3SP0C7P2 107 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 RCC1P18754 421 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 ZNF585AQ6P3V2 769 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 Q7L0L9 218 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM17Q86X19 198 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 NAT6Q93015 286 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 MARC2Q969Z3 335 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 ZNF2Q9BSG1 426 aaPredicted RBP13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 DNTTIP1Q9H147 329 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 PRDM6Q9NQX0 595 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 SLC39A1Q9NY26 324 aa13.59□□□□□ -0.23
TMEM50A-201ENST00000374358 GPR179Q6PRD1 2367 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 NSG1A0A0A6YYJ2 146 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 A0A1B0GW55 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 F8VVB4 439 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 F8VWA3 439 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 SERPINA5P05154 406 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L2P0CJ85 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L3P0CJ86 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L4P0CJ87 422 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L5P0CJ88 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L6P0CJ89 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4L7P0CJ90 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 AIMP2Q13155 320 aaKnown RBP13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 SEMA6DQ8NFY4 1073 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 SMOC1Q9H4F8 434 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 RAB18Q9NP72 206 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DUX4Q9UBX2 424 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 PRELID1Q9Y255 219 aa13.58□□□□□ -0.23
TMEM50A-201ENST00000374358 DOCK7Q96N67 2140 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 FIGNL2A6NMB9 653 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 CPT2P23786 658 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF700Q9H0M5 742 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 LOC400499M0QZD8 3231 aa13.58□□□□□ -0.24
TMEM50A-201ENST00000374358 TAS2R46P59540 309 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 IL11RAQ14626 422 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 OR2A2Q6IF42 318 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 CLEC9AQ6UXN8 241 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 FGFBP3Q8TAT2 258 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 STOML3Q8TAV4 291 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 DOCK10Q96BY6 2186 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 A0A087WZY1 265 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 TOR1AO14656 332 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SGCEO43556 437 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 EIF1BO60739 113 aaKnown RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 HIST2H3PS2Q5TEC6 136 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 PRSS54Q6PEW0 395 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 HIST2H3AQ71DI3 136 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SLC16A14Q7RTX9 510 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 AGBL5Q8NDL9 886 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 TOMM40LQ969M1 308 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 REEP6Q96HR9 211 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SH2D2AQ9NP31 389 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 C9J4A7 227 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 ICAM2P13598 275 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 PIGYQ3MUY2 71 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SP6Q3SY56 376 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 TSPO2Q5TGU0 170 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 FOXL2NBQ6ZUU3 175 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SLC30A7Q8NEW0 376 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 OR4A4PQ8NGN8 299 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 EMG1Q92979 244 aaKnown RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 Q96M66 194 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 TM2D1Q9BX74 207 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms