RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 SHISA2Q6UWI4 295 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 KIR3DL3Q8N743 410 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 OR51G2Q8NGK0 314 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 ZNF671Q8TAW3 534 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 AQP3Q92482 292 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 TAF15Q92804 592 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 GABARAPL3Q9BY60 117 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 UNKLQ9H9P5 680 aaKnown RBP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 ONECUT1Q9UBC0 465 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 WARS2Q9UGM6 360 aaKnown RBP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 OR52A1Q9UKL2 312 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 OAZ3Q9UMX2 235 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 GTF2A1LQ9UNN4 478 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 OR2AT4A6NND4 320 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 SIGLEC5O15389 551 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 CIB2O75838 187 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 NRASP01111 189 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 TFF1P04155 84 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 BCL2L15Q5TBC7 163 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 TMEM42Q69YG0 159 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 HAGHLQ6PII5 290 aaPredicted RBP17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 METAP1DQ6UB28 335 aaPredicted RBP17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 PLEKHG7Q6ZR37 379 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 CMTM4Q8IZR5 234 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 TMIGD2Q96BF3 282 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 OSBPL10Q9BXB5 764 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 SLC25A10Q9UBX3 287 aaPredicted RBP17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 ZNF222Q9UK12 451 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 SNX5Q9Y5X3 404 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 POMT1Q9Y6A1 747 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 V9GYS6 101 aa17.86■□□□□ 0.45
CCDC28B-201ENST00000373602 IGKV1D-17A0A075B6S4 117 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 A0A1B0GTI1 187 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 POM121CA8CG34 1229 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 PSG2P11465 335 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 CAV3P56539 151 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 ZNF684Q5T5D7 378 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 Q6ZSR3 168 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 SSX6Q7RTT6 188 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 PDZD9Q8IXQ8 264 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 OR14K1Q8NGZ2 314 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 H1FXQ92522 213 aaKnown RBP17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 RIBC2Q9H4K1 309 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 TNFRSF19Q9NS68 423 aa17.85■□□□□ 0.45
CCDC28B-201ENST00000373602 A0A0U1RQK1 487 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 FAM181BA6NEQ2 426 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 HTR1FP30939 366 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 GABRA2P47869 451 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 CLVS2Q5SYC1 327 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 Q8N7P7 452 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 OR8J1Q8NGP2 316 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 SSMEM1Q8WWF3 244 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 CHIAQ9BZP6 476 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 RASL12Q9NYN1 266 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 MAB21L2Q9Y586 359 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 MMP24Q9Y5R2 645 aa17.84■□□□□ 0.45
CCDC28B-201ENST00000373602 SAC3D1A6NKF1 404 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 DHRS7CA6NNS2 312 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 DLGAP1O14490 977 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 KRT8P05787 483 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 OR2T7P0C7T2 308 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 NDUFB7P17568 137 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 MDKP21741 143 aaPredicted RBP17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 FIP1L1Q6UN15 594 aaKnown RBP17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 C1orf122Q6ZSJ8 110 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 ASRGL1Q7L266 308 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 LDLRAD3Q86YD5 345 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 YIPF7Q8N8F6 280 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 POC1AQ8NBT0 407 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 OR2T27Q8NH04 317 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 TBC1D15Q8TC07 691 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 SDSLQ96GA7 329 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 TBX5Q99593 518 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 RBM4BQ9BQ04 359 aaKnown RBP17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 SIRT7Q9NRC8 400 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 GPR173Q9NS66 373 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 SLC22A13Q9Y226 551 aa17.83■□□□□ 0.44
CCDC28B-201ENST00000373602 A0A1W2PQL4 384 aaPredicted RBP17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 SPRY1O43609 319 aaPredicted RBP17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 RPP14O95059 124 aaKnown RBP17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 CCL1P22362 96 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 OMGP23515 440 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 GUCA2AQ02747 115 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 TMED1Q13445 227 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 ACP7Q6ZNF0 438 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNF573Q86YE8 665 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNRF1Q8ND25 227 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 NPRL2Q8WTW4 380 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 EME1Q96AY2 570 aa17.82■□□□□ 0.44
CCDC28B-201ENST00000373602 PQLC2LA1A4F0 135 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 METTL15A6NJ78 407 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 RNASEK-C17orf49H0YIS7 233 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 J3QT63 122 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 M0R1W7 72 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 SYNGR1O43759 233 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 APOL3O95236 402 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 CRYBA1P05813 215 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 PGA5P0DJD9 388 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 IER3P46695 156 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms