RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 WFIKKN1Q96NZ8 548 aa17.8■□□□□ 0.44
SYNC-201ENST00000373484 ALKBH3Q96Q83 286 aaPredicted RBP17.8■□□□□ 0.44
SYNC-201ENST00000373484 LAMP5Q9UJQ1 280 aa17.8■□□□□ 0.44
SYNC-201ENST00000373484 PRR14LQ5THK1 2151 aa17.8■□□□□ 0.44
SYNC-201ENST00000373484 CENPEQ02224 2701 aa17.8■□□□□ 0.44
SYNC-201ENST00000373484 NDUFA2O43678 99 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 SLC25A4P12235 298 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 GTF2F2P13984 249 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 MELKQ14680 651 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 ACKR1Q16570 336 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 BHLHA15Q7RTS1 189 aaPredicted RBP17.79■□□□□ 0.44
SYNC-201ENST00000373484 ZNF511Q8NB15 262 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 OR52B4Q8NGK2 314 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 FAM222BQ8WU58 562 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 C4orf45Q96LM5 186 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 RASL12Q9NYN1 266 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 ZNF587BE7ETH6 402 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 ABCD4O14678 606 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 OR2F2O95006 317 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 RENP00797 406 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 IGHMP01871 453 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 DAP3P51398 398 aaKnown RBP17.79■□□□□ 0.44
SYNC-201ENST00000373484 CAPZA1P52907 286 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 OR2F1Q13607 317 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 RAB11BQ15907 218 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 CARD17Q5XLA6 110 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 STEAP1BQ6NZ63 245 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 C22orf34Q6ZV56 151 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 TMEM17Q86X19 198 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 C20orf196Q8IYI0 205 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 GPR137CQ8N3F9 429 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 OR10Z1Q8NGY1 313 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 ASB10Q8WXI3 467 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 TMEM106AQ96A25 262 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 S100PBPQ96BU1 408 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 SLC25A44Q96H78 314 aaPredicted RBP17.79■□□□□ 0.44
SYNC-201ENST00000373484 TXNIPQ9H3M7 391 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 KLHDC2Q9Y2U9 406 aa17.79■□□□□ 0.44
SYNC-201ENST00000373484 TRAV8-7A0A075B6U6 113 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 RPP14O95059 124 aaKnown RBP17.78■□□□□ 0.44
SYNC-201ENST00000373484 WNT11O96014 354 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 CTXN1P60606 82 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 PHYHD1Q5SRE7 291 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 CCDC36Q8IYA8 594 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 KCNRGQ8N5I3 272 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 C12orf45Q8N5I9 185 aaPredicted RBP17.78■□□□□ 0.44
SYNC-201ENST00000373484 OR51S1Q8NGJ8 323 aa17.78■□□□□ 0.44
SYNC-201ENST00000373484 MRPS24Q96EL2 167 aaKnown RBP17.78■□□□□ 0.44
SYNC-201ENST00000373484 USB1Q9BQ65 265 aaKnown RBP17.78■□□□□ 0.44
SYNC-201ENST00000373484 RPL36A-HNRNPH2H7BZ11 118 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 HLA-GP17693 338 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 RAB3AP20336 220 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 SOX2P48431 317 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 C2orf68Q2NKX9 166 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 C9orf135Q5VTT2 229 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 UQCC3Q6UW78 93 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 MOB3CQ70IA8 216 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 ZNF295-AS1Q8N0V1 137 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 FAM3DQ96BQ1 224 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 TMEM138Q9NPI0 162 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 IFT46Q9NQC8 304 aa17.77■□□□□ 0.44
SYNC-201ENST00000373484 A0A1B0GTI1 187 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 RAD51DO75771 328 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 PGA4P0DJD7 388 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 PGA3P0DJD8 388 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 PTHLHP12272 177 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 MPZP25189 248 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 MAGEB1P43366 347 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 POU3F4P49335 361 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 TGFBR3Q03167 851 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 ZMYND11Q15326 602 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 GABRA6Q16445 453 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 C1orf162Q8NEQ5 155 aaPredicted RBP17.77■□□□□ 0.43
SYNC-201ENST00000373484 PTX4Q96A99 478 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 INTS14Q96SY0 518 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 GPR35Q9HC97 309 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 GRHPRQ9UBQ7 328 aa17.77■□□□□ 0.43
SYNC-201ENST00000373484 TMEM272A0A1B0GTI8 110 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 THBDP07204 575 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 FSTP19883 344 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 CSNK1A1P48729 337 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 RPL27P61353 136 aaKnown RBP17.76■□□□□ 0.43
SYNC-201ENST00000373484 C4orf46Q504U0 113 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 DCAF12L2Q5VW00 463 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 C11orf88Q6PI97 169 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 ST8SIA2Q92186 375 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 TMEM54Q969K7 222 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 C14orf79Q96F83 325 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 WDR89Q96FK6 387 aaPredicted RBP17.76■□□□□ 0.43
SYNC-201ENST00000373484 TSPAN32Q96QS1 320 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 C1QTNF6Q9BXI9 259 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 MRPL13Q9BYD1 178 aaKnown RBP17.76■□□□□ 0.43
SYNC-201ENST00000373484 CRLF2Q9HC73 371 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 IKZF2Q9UKS7 526 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 ZNF346Q9UL40 294 aaKnown RBP17.76■□□□□ 0.43
SYNC-201ENST00000373484 UNC79Q9P2D8 2635 aa17.76■□□□□ 0.43
SYNC-201ENST00000373484 TRAV18A0A075B6X5 111 aa17.75■□□□□ 0.43
SYNC-201ENST00000373484 MEGF11A6BM72 1044 aa17.75■□□□□ 0.43
SYNC-201ENST00000373484 PSMD9O00233 223 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms