RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 OR2AK2Q8NG84 335 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 DVL3Q92997 716 aaPredicted RBP12.25□□□□□ -0.45
LDB3-204ENST00000372066 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 GAL3ST1Q99999 423 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 ZNF224Q9NZL3 707 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 AKR7A2O43488 359 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 CA11O75493 328 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 WISP2O76076 250 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 COX6B1P14854 86 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 HIST1H1DP16402 221 aaKnown RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 NAT1P18440 290 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 PTGFRP43088 359 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 STARP49675 285 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 LHX2P50458 406 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 RPS27AP62979 156 aaKnown RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 GK2Q14410 553 aaPredicted RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 PPA1Q15181 289 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 CNN3Q15417 329 aaKnown RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 FAHD2BQ6P2I3 314 aaPredicted RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 FAM89BQ8N5H3 189 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 SEMA6DQ8NFY4 1073 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 OR11H4Q8NGC9 324 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 TNFAIP8L1Q8WVP5 186 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 FAHD2AQ96GK7 314 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 SIGLEC12Q96PQ1 595 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 ALKBH3Q96Q83 286 aaPredicted RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 SELENOIQ9C0D9 397 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 PIPOXQ9P0Z9 390 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 MYEF2Q9P2K5 600 aaKnown RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 MCTS1Q9ULC4 181 aaKnown RBP12.24□□□□□ -0.45
LDB3-204ENST00000372066 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
LDB3-204ENST00000372066 G3V3Q6 166 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 KLRC4-KLRK1H3BQV0 150 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 M0QYG6 137 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 ZNF708P17019 499 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 PRKACBP22694 351 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 SNRPD2P62316 118 aaKnown RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 IKZF1Q13422 519 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 CLVS2Q5SYC1 327 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 LPCAT3Q6P1A2 487 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 SULF2Q8IWU5 870 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 S100A13Q99584 98 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 TTTY12Q9BZ98 90 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 POFUT1Q9H488 388 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 ZMAT3Q9HA38 289 aaKnown RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 EIF3KQ9UBQ5 218 aaKnown RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 PIGLQ9Y2B2 252 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 NOSIPQ9Y314 301 aaKnown RBP12.23□□□□□ -0.45
LDB3-204ENST00000372066 MYO7BQ6PIF6 2116 aa12.23□□□□□ -0.45
LDB3-204ENST00000372066 OR14I1A6ND48 311 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 ZNF724A8MTY0 619 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 E9PLN8 166 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 F5H5P2 479 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 MFNGO00587 321 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 XRCC2O43543 280 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 NME2P1O60361 137 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 MRPL33O75394 65 aaKnown RBP12.22□□□□□ -0.45
LDB3-204ENST00000372066 CRTAPO75718 401 aaPredicted RBP12.22□□□□□ -0.45
LDB3-204ENST00000372066 OR4E1P0C645 316 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 FAHP16930 419 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 ZNF32P17041 273 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 NME2P22392 152 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 CPT2P23786 658 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 PTGER4P35408 488 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 CLDN18P56856 261 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 TSPAN5P62079 268 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 C3AR1Q16581 482 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 VAX1Q5SQQ9 334 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 C1QTNF12Q5T7M4 302 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 ZBTB37Q5TC79 503 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
LDB3-204ENST00000372066 ARRDC1Q8N5I2 433 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 MDS2Q8NDY4 140 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 ZNF837Q96EG3 531 aaPredicted RBP12.22□□□□□ -0.45
LDB3-204ENST00000372066 OCSTAMPQ9BR26 566 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 OR2H1Q9GZK4 316 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 CA10Q9NS85 328 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 HMSDA8MTL9 139 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 ACTL6AO96019 429 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 IFNA6P05013 189 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 SP1P08047 785 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 DBHP09172 617 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 COX5BP10606 129 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 B4GALT1P15291 398 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 GNB3P16520 340 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 NTF4P34130 210 aa12.22□□□□□ -0.45
LDB3-204ENST00000372066 HTR5AP47898 357 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms