RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HAAOP46952 286 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 LMO4P61968 165 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 MED22Q15528 200 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 UBE2V2Q15819 145 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 ZNF404Q494X3 552 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-204ENST00000370496 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 ZNF573Q86YE8 665 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 LINC01356Q8N9X3 169 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 ZNF485Q8NCK3 441 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 OR13C9Q8NGT0 318 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 RPS4Y2Q8TD47 263 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 GPR148Q8TDV2 347 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 RGP1Q92546 391 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-204ENST00000370496 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 OR51I2Q9H344 312 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 DUSP21Q9H596 190 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 POLDIP2Q9Y2S7 368 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-204ENST00000370496 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 B4DSR2 109 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 FAM157AC9JC47 383 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 J3QT63 122 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 LGALS8O00214 317 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OGG1O15527 345 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 TGFAP01135 160 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 SOX2P48431 317 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 FAM76BQ5HYJ3 339 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 DMKNQ6E0U4 476 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-204ENST00000370496 DCDC5Q6ZRR9 648 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 NLRC3Q7RTR2 1065 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 PRSS48Q7RTY5 328 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 C11orf53Q8IXP5 236 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OR10Z1Q8NGY1 313 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OR51F2Q8NH61 342 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 SPSB1Q96BD6 273 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 TMEM246Q9BRR3 403 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 NEK6Q9HC98 313 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 KCNS2Q9ULS6 477 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 ZNF281Q9Y2X9 895 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL9A1-204ENST00000370496 ABCA1O95477 2261 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 SRRM5B3KS81 715 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 AKR7A2O43488 359 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 RHBDL1O75783 438 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 FSTL3O95633 263 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 PLATP00750 562 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 CELP19835 753 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 AZGP1P25311 298 aaKnown RBP12.43□□□□□ -0.42
COL9A1-204ENST00000370496 FUT6P51993 359 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 GABARAPL2P60520 117 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 BDH1Q02338 343 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 SPHARQ15513 63 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 MICBQ29980 383 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 ESCO2Q56NI9 601 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OR8B3Q8NGG8 313 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OR13C5Q8NGS8 318 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 AQP3Q92482 292 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 GHSRQ92847 366 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 TMEM106AQ96A25 262 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 PGLYRP3Q96LB9 341 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OPALINQ96PE5 141 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 OR8B2Q96RD0 313 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 PATZ1Q9HBE1 687 aaKnown RBP12.43□□□□□ -0.42
COL9A1-204ENST00000370496 TMEM165Q9HC07 324 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 MIOXQ9UGB7 285 aa12.43□□□□□ -0.42
COL9A1-204ENST00000370496 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 A8MV72 311 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-204ENST00000370496 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-204ENST00000370496 SULT1B1O43704 296 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 LHBP01229 141 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 MSMBP08118 114 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 ATF1P18846 271 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 PRKACBP22694 351 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 GLRA1P23415 457 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 CFHR2P36980 270 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 RBP2P50120 134 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 IRF3Q14653 427 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 YIF1BQ5BJH7 314 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 SERPINA12Q8IW75 414 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 OR5D14Q8NGL3 314 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 ZNF671Q8TAW3 534 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 NEIL1Q96FI4 390 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-204ENST00000370496 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 ZCCHC4Q9H5U6 513 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 LRCH1Q9Y2L9 728 aa12.42□□□□□ -0.42
COL9A1-204ENST00000370496 LSM2Q9Y333 95 aaKnown RBP12.42□□□□□ -0.42
COL9A1-204ENST00000370496 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
COL9A1-204ENST00000370496 NKX6-3A6NJ46 265 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms