RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 WIF1Q9Y5W5 379 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 KCNE3Q9Y6H6 103 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 UNC79Q9P2D8 2635 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 TRBV4-1A0A0J9YWV2 114 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 C9JQL5 133 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PMS2P2O95744 297 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 GABRA3P34903 492 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 IFNGR2P38484 337 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PTH2RP49190 550 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SCAND1P57086 179 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 OR10A3P58181 314 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PRDX4Q13162 271 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 USF2Q15853 346 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 TRMT12Q53H54 448 aaKnown RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF613Q6PF04 617 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 LINGO2Q7L985 606 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 OR1J2Q8NGS2 313 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SLC2A12Q8TD20 617 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 CDS1Q92903 461 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 OR7D2Q96RA2 312 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 COMMD4Q9H0A8 199 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 LPAR2Q9HBW0 351 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SPRR3Q9UBC9 169 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PPP1R2P9O14990 202 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 RLN1P04808 185 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 FOLR3P41439 243 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 OR3A1P47881 315 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 DIO1P49895 249 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SULT1A1P50225 295 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SMIM11AP58511 58 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF620Q6ZNG0 422 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 GGNQ86UU5 652 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 RNFT2Q96EX2 444 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 KIRREL1Q96J84 757 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SGCZQ96LD1 299 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 SYT3Q9BQG1 590 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 WWTR1Q9GZV5 400 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 FAM212BQ9NTI7 297 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF462Q96JM2 2506 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SMIM30A4D0T7 59 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CDC14CA4D256 554 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 PYCARD-AS1I3L0S3 204 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 GOSR2O14653 212 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 FFAR1O14842 300 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 XRCC3O43542 346 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 EFNA2O43921 213 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 FCMRO60667 390 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 NKX2-2O95096 273 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SP1P08047 785 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CHRM4P08173 479 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 NBEAP1P0C6P0 100 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ADH6P28332 368 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 BRS3P32247 399 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CA7P43166 264 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 GIPRP48546 466 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 RPS23P62266 143 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ARF6P62330 175 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 MADCAM1Q13477 382 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 RBM39Q14498 530 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 DEFB109BQ30KR1 87 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 AKIRIN2Q53H80 203 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TMEM164Q5U3C3 297 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 DMRTA1Q5VZB9 504 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 PGBD2Q6P3X8 592 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 APOOLQ6UXV4 268 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TMEM64Q6YI46 380 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SLC35D2Q76EJ3 337 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TCF24Q7RTU0 167 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 IQCF1Q8N6M8 205 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ORAOV1Q8WV07 137 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 PHYHIPQ92561 330 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ZG16BQ96DA0 208 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SLC25A38Q96DW6 304 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 GAL3ST4Q96RP7 486 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 AUNIPQ9H7T9 357 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 PNO1Q9NRX1 252 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 HAO2Q9NYQ3 351 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 KCNG2Q9UJ96 466 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 A0A1W2PQD3 144 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 FRG2CA6NGY1 282 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 OR5H14A6NHG9 310 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 AQP7O14520 342 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ZIC3O60481 467 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 KNG1P01042 644 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TK1P04183 234 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 MTNR1AP48039 350 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ACTBL2Q562R1 376 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 C1orf189Q5VU69 101 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 BHLHA15Q7RTS1 189 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 THNSL2Q86YJ6 484 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 C10orf53Q8N6V4 93 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TCEANCQ8N8B7 351 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SEMA6DQ8NFY4 1073 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 OR7G2Q8NG99 324 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 OR6T1Q8NGN1 323 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 GRHL3Q8TE85 626 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 C8orf44Q96CB5 159 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 PACRGQ96M98 296 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 MCHR1Q99705 422 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms