RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 NPIPB4C9JG80 1138 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 KNG1P01042 644 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 PI3P19957 117 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CTSSP25774 331 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 HOXA4Q00056 320 aaPredicted RBP12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CLVS2Q5SYC1 327 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 ZDHHC23Q8IYP9 409 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 KCNG3Q8TAE7 436 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 STARD4Q96DR4 205 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 FAM172BPA6NC97 362 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 BET1O15155 118 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 TOXO94900 526 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CD53P19397 219 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 PTGFRP43088 359 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CD200R1LQ6Q8B3 271 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 SOCS1O15524 211 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 SYNGR3O43761 229 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 PMP2P02689 132 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 ZNF16P17020 682 aaPredicted RBP12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 TEX30Q5JUR7 227 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CCDC190Q86UF4 302 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 FOXRED2Q8IWF2 684 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
SEMA6C-204ENST00000368914 MEIOCA2RUB1 952 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 RAB3DO95716 219 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 DHFRP00374 187 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 SPNP16150 400 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 AKR1C4P17516 323 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 PRKACBP22694 351 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 FAUP35544 74 aaKnown RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 CCL8P80075 99 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 NSUN5P2Q63ZY6 315 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 KCTD12Q96CX2 325 aaKnown RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 F5H5P2 479 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ZG16O60844 167 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 RAD52P43351 418 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ZNF181Q2M3W8 571 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 PIGYQ3MUY2 71 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 PHYHIPQ92561 330 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ADAT1Q9BUB4 502 aaKnown RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 A1L4Q6 167 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 CECR9P0C854 216 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 AP3S2P59780 193 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ST3GAL2Q16842 350 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 KCTD9Q7L273 389 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 FOXRED1Q96CU9 486 aaPredicted RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 CMSS1Q9BQ75 279 aaKnown RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 SRRQ9GZT4 340 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 ZNF69Q9UC07 566 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 NDRG3Q9UGV2 375 aa12.33□□□□□ -0.44
SEMA6C-204ENST00000368914 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 NCKAP5O14513 1909 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 UCP2P55851 309 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 TNK1Q13470 666 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 FBXO9Q9UK97 447 aaPredicted RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 A0A1B0GTI1 187 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 ZNF736B4DX44 427 aaPredicted RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 ZNF79Q15937 498 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 OLFML2AQ68BL7 652 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 MYPOPQ86VE0 399 aaPredicted RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 RBFOX1Q9NWB1 397 aaKnown RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 LILRA1O75019 489 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 TSPAN9O75954 239 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 IGHG3P01860 377 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 UBE2MP61081 183 aaKnown RBP12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 CACNG2Q9Y698 323 aa12.32□□□□□ -0.44
SEMA6C-204ENST00000368914 NUP210LQ5VU65 1888 aa12.31□□□□□ -0.44
SEMA6C-204ENST00000368914 FLNBO75369 2602 aaKnown RBP12.31□□□□□ -0.44
SEMA6C-204ENST00000368914 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
SEMA6C-204ENST00000368914 PCP4L1A6NKN8 68 aa12.31□□□□□ -0.44
SEMA6C-204ENST00000368914 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
SEMA6C-204ENST00000368914 FAM3AP98173 230 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms