RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TFF1P04155 84 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 LIPFP07098 398 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 SELLP14151 372 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 KIR3DL2P43630 455 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 CDONQ4KMG0 1287 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 ZNF788Q6ZQV5 615 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 FAM216AQ8WUB2 273 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
CKS1B-203ENST00000368439 GAFA1Q96PS6 74 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 JMJD8Q96S16 334 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 TBX15Q96SF7 602 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 DNTTIP1Q9H147 329 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 GPR173Q9NS66 373 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 ACOXLQ9NUZ1 547 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 PQLC2LA1A4F0 135 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 A6NIN4 97 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 ECDO95905 644 aaPredicted RBP15.66■□□□□ 0.1
CKS1B-203ENST00000368439 SFTPBP07988 381 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 ODF4Q2M2E3 257 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 HAGHLQ6PII5 290 aaPredicted RBP15.66■□□□□ 0.1
CKS1B-203ENST00000368439 SLC36A1Q7Z2H8 476 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 LY6G5BQ8NDX9 201 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 RHOXF1Q8NHV9 184 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 ST8SIA4Q92187 359 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 FAM118AQ9NWS6 357 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 DNAJB11Q9UBS4 358 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 RPUSD1Q9UJJ7 312 aaKnown RBP15.66■□□□□ 0.1
CKS1B-203ENST00000368439 GNG8Q9UK08 70 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 ZNF222Q9UK12 451 aa15.66■□□□□ 0.1
CKS1B-203ENST00000368439 TENM1Q9UKZ4 2725 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 IGKV1D-17A0A075B6S4 117 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 LOC100130705A0A1B0GUX0 176 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 TRIM77I1YAP6 450 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 SLC16A6O15403 523 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 GLRA1P23415 457 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 ACTC1P68032 377 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 ACTA1P68133 377 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 PNLDC1Q8NA58 520 aaKnown RBP15.65■□□□□ 0.1
CKS1B-203ENST00000368439 LGALS12Q96DT0 336 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 WDFY2Q96P53 400 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 MS4A7Q9GZW8 240 aaPredicted RBP15.65■□□□□ 0.1
CKS1B-203ENST00000368439 NLKQ9UBE8 527 aa15.65■□□□□ 0.1
CKS1B-203ENST00000368439 OR2AT4A6NND4 320 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 H3BSH0 61 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 SYT7O43581 403 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 SYNGR1O43759 233 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 BAG2O95816 211 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 ACAA1P09110 424 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-203ENST00000368439 DBTP11182 482 aaKnown RBP15.64■□□□□ 0.09
CKS1B-203ENST00000368439 PSG2P11465 335 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 OR12D2P58182 307 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 UBA52P62987 128 aaKnown RBP15.64■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF91Q05481 1191 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 IKZF1Q13422 519 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 DGUOKQ16854 277 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 FDX2Q6P4F2 183 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 POC1AQ8NBT0 407 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF671Q8TAW3 534 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 APH1BQ8WW43 257 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF649Q9BS31 505 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 PCGF1Q9BSM1 259 aa15.64■□□□□ 0.09
CKS1B-203ENST00000368439 A0A1B0GVI7 797 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 DAPL1A0PJW8 107 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 ANKRD61A6NGH8 418 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 J3QT63 122 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 GPR37O15354 613 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 SIGLEC5O15389 551 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 NDUFB3O43676 98 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 MPZL2O60487 215 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 NOS1APO75052 506 aaPredicted RBP15.63■□□□□ 0.09
CKS1B-203ENST00000368439 TOX4O94842 621 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 PGA5P0DJD9 388 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 MPZP25189 248 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 HAAOP46952 286 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 NANOS3P60323 173 aaKnown RBP15.63■□□□□ 0.09
CKS1B-203ENST00000368439 UBE2V2Q15819 145 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 BRD3OSQ6XYD6 125 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 FAM220AQ7Z4H9 259 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 KCTD20Q7Z5Y7 419 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF573Q86YE8 665 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 CALHM1Q8IU99 346 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 RDH10Q8IZV5 341 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 ACBD7Q8N6N7 88 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 CCDC54Q8NEL0 328 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 OR2G2Q8NGZ5 317 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 C8orf46Q8TAG6 207 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 TMIGD2Q96BF3 282 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 DMRTB1Q96MA1 342 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 ZNF488Q96MN9 340 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 DCTN5Q9BTE1 182 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 PRDM13Q9H4Q3 707 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 CNTD2Q9H8S5 307 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 RASL12Q9NYN1 266 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 FRRS1LQ9P0K9 344 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 MYRFQ9Y2G1 1151 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 MAB21L2Q9Y586 359 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 PCDHGB1Q9Y5G3 927 aa15.63■□□□□ 0.09
CKS1B-203ENST00000368439 CENPVL3A0A0U1RRI6 287 aa15.62■□□□□ 0.09
CKS1B-203ENST00000368439 LOC107986453A0A1B0GWG9 222 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms