RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SCGB2A2Q13296 93 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 CDC20BQ86Y33 519 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 MOB3AQ96BX8 217 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 EXOGQ9Y2C4 368 aaKnown RBP10.27□□□□□ -0.76
SYNE1-204ENST00000367248 CCSO14618 274 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 SUB1P53999 127 aaKnown RBP eCLIP10.27□□□□□ -0.76
SYNE1-204ENST00000367248 FAM181AQ8N9Y4 354 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 ASB5Q8WWX0 329 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 NMES1Q9C002 83 aa10.27□□□□□ -0.76
SYNE1-204ENST00000367248 RALYQ9UKM9 306 aaKnown RBP10.27□□□□□ -0.76
SYNE1-204ENST00000367248 DVL1O14640 695 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 FADS1O60427 444 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 DFFBO76075 338 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 DVL1P1P54792 670 aaPredicted RBP10.27□□□□□ -0.77
SYNE1-204ENST00000367248 TESK1Q15569 626 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 ETFDHQ16134 617 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 OR14K1Q8NGZ2 314 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 ARPC5LQ9BPX5 153 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 HRH4Q9H3N8 390 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 PEA15Q15121 130 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 PNLIPRP3Q17RR3 467 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 C8orf82Q6P1X6 216 aaPredicted RBP10.27□□□□□ -0.77
SYNE1-204ENST00000367248 CATSPERDQ86XM0 798 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 LYG1Q8N1E2 194 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 RSRP1Q9BUV0 290 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 C20orf24Q9BUV8 137 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 AUNIPQ9H7T9 357 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 DLL4Q9NR61 685 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 PLPP2O43688 288 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 NGFRP08138 427 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 RTN4IP1Q8WWV3 396 aaPredicted RBP10.27□□□□□ -0.77
SYNE1-204ENST00000367248 ASB10Q8WXI3 467 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 KISS1Q15726 138 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM65Q6PI78 240 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 OR13C8Q8NGS7 320 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 POFUT1Q9H488 388 aa10.27□□□□□ -0.77
SYNE1-204ENST00000367248 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TOX4O94842 621 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 ALDH3B1P43353 468 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 RIF1Q5UIP0 2472 aaKnown RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SELENOPP49908 381 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 BGLAPP02818 100 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 LSM6P62312 80 aaKnown RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TLE1Q04724 770 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 MPPED2Q15777 294 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 FAAP20Q6NZ36 180 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 MOGAT3Q86VF5 341 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 GPX8Q8TED1 209 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 NTMQ9P121 344 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 LAMP3Q9UQV4 416 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM30CPA0ZSE6 113 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TRAPPC2P0DI81 140 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TRAPPC2BP0DI82 140 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 AADACP22760 399 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 C1orf185Q5T7R7 199 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 OR2W3Q7Z3T1 314 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 MRGPRGQ86SM5 289 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 PTDSS2Q9BVG9 487 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 CNTNAP3Q9BZ76 1288 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 OPN1MWP04001 364 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 OPN1MW2P0DN77 364 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 OPN1MW3P0DN78 364 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 DCTDP32321 178 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 HRH1P35367 487 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 RAB5BP61020 215 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 BAMBIQ13145 260 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 OXA1LQ15070 435 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 CLEC2AQ6UVW9 174 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 ADPRHL1Q8NDY3 354 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 PLEKHB1Q9UF11 243 aaPredicted RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 XRCC3O43542 346 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 RAB4AP20338 218 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 TMEM268Q5VZI3 342 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SLC51BQ86UW2 128 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 SUMF2Q8NBJ7 301 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF275Q9NSD4 429 aaPredicted RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
SYNE1-204ENST00000367248 ONECUT2O95948 504 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 GALP22466 123 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 ZNF85Q03923 595 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CTF1Q16619 201 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 CLDN23Q96B33 292 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 HS3ST3B1Q9Y662 390 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 SPANXN5Q5MJ07 72 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 AVPI1Q5T686 147 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 FAM213BQ8TBF2 198 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 AMDHD2Q9Y303 409 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 MPC1Q9Y5U8 109 aa10.25□□□□□ -0.77
SYNE1-204ENST00000367248 TGM6O95932 706 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms