RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CT55Q8WUE5 264 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 FPR2P25090 351 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 SOX8P57073 446 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 TNXAQ16473 311 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 DYNLRB2Q8TF09 96 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 GPR87Q9BY21 358 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 SLC25A37Q9NYZ2 338 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 TRAV1-2A0A0B4J238 106 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 OR2T8A6NH00 312 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 DHRS3O75911 302 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 UBE2MP61081 183 aaKnown RBP14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 C1RLQ9NZP8 487 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 CRXO43186 299 aaPredicted RBP14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 GPANK1O95872 356 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 PCMT1P22061 227 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 CD200P41217 278 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 BAK1Q16611 211 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 PTOV1Q86YD1 416 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 TUSC5Q8IXB3 177 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 BAP18Q8IXM2 172 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 FGF20Q9NP95 211 aaPredicted RBP14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 MYH6P13533 1939 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 RPL34P49207 117 aaKnown RBP14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 LYZP61626 148 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 FABP5Q01469 135 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 PRSS36Q5K4E3 855 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 CHAC2Q8WUX2 184 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 TMEM231Q9H6L2 316 aa14.04□□□□□ -0.16
NUCKS1-201ENST00000367142 H3BP45 60 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 HSBP1O75506 76 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 AGFG2O95081 481 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ARRDC1Q8N5I2 433 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ISG20L2Q9H9L3 353 aaKnown RBP14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 OR2W5A6NFC9 320 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 LIMK1P53667 647 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 RANP62826 216 aaKnown RBP14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 TMEM267Q0VDI3 215 aaPredicted RBP14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ZNF774Q6NX45 483 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ASCL5Q7RTU5 278 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 BLNKQ8WV28 456 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 PPM1DO15297 605 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 GABRB1P18505 474 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 USF1P22415 310 aaPredicted RBP14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 TIAM2Q8IVF5 1701 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 MASP2O00187 686 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 CD82P27701 267 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 NXPH1P58417 271 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 TMEM128Q5BJH2 165 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 MZB1Q8WU39 189 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ADTRPQ96IZ2 230 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 RNF167Q9H6Y7 350 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 SLC17A2O00624 439 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ZNF793Q6ZN11 406 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 C4orf45Q96LM5 186 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 GSX2Q9BZM3 304 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 OR2D2Q9H210 308 aa14.03□□□□□ -0.16
NUCKS1-201ENST00000367142 ETHE1O95571 254 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 SLC25A1P53007 311 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 OR1A1Q9P1Q5 309 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 FLVCR2Q9UPI3 526 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 IGHV1OR15-9A0A0B4J2B8 117 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 FAM157AC9JC47 383 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 VAMP3Q15836 100 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 VSTM2AQ8TAG5 236 aa14.02□□□□□ -0.16
NUCKS1-201ENST00000367142 C3orf80F5H4A9 247 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF32P17041 273 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC38A11Q08AI6 406 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 ERRFI1Q9UJM3 462 aaPredicted RBP14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 POMT1Q9Y6A1 747 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 RGPD8O14715 1765 aaPredicted RBP14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 RGPD5Q99666 1765 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 BCL2L11O43521 198 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 LHX8Q68G74 356 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 RHOFQ9HBH0 211 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A1W2PRD5 423 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A1W2PRF3 423 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A1W2PRM7 423 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 SEMA7AO75326 666 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 MRGPREQ86SM8 312 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 RNF2Q99496 336 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 AUNIPQ9H7T9 357 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 MMP25Q9NPA2 562 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 LHX9Q9NQ69 397 aa14.02□□□□□ -0.17
NUCKS1-201ENST00000367142 GATCO43716 136 aaKnown RBP14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 PGFP49763 221 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 UCNP55089 124 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 DMRTC1Q5HYR2 192 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 PLA2G2FQ9BZM2 168 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 IGHV5-51A0A0C4DH38 117 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 TUBAL3A6NHL2 446 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 GYPAP02724 150 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 OR4C16Q8NGL9 310 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 RFESDQ8TAC1 157 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 RAB40CQ96S21 281 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms