RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ANKDD1AQ495B1 522 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 TNFAIP8L3Q5GJ75 292 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 MBOAT2Q6ZWT7 520 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 TCF23Q7RTU1 214 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 CROCCP2Q86T23 111 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ADCK1Q86TW2 530 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 OSR2Q8N2R0 312 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 KLHL30-AS1Q8NEE0 82 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR51D1Q8NGF3 324 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR10Z1Q8NGY1 313 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 HPSE2Q8WWQ2 592 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR5P3Q8WZ94 311 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 FOXRED1Q96CU9 486 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 PRRC1Q96M27 445 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 GPX7Q96SL4 187 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 NMNAT3Q96T66 252 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF256Q9Y2P7 627 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 TBL2Q9Y4P3 447 aaKnown RBP6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 LRP12Q9Y561 859 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 SMAD5-AS1Q9Y6J3 95 aa6.68□□□□□ -1.34
HMGB1P39-201ENST00000366304 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 PSMB11A5LHX3 300 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 HTR3EA5X5Y0 456 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR6C68A6NDL8 312 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 CCL24O00175 119 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 MTRF1O75570 445 aaKnown RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 TIPRLO75663 272 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 NDUFB2O95178 105 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 PIPP12273 146 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 ACKR3P25106 362 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 RAB25P57735 213 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 TAGLNQ01995 201 aaKnown RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 MZT1Q08AG7 82 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 RIPK1Q13546 671 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 CYBRD1Q53TN4 286 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 FAM76BQ5HYJ3 339 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 AGBL2Q5U5Z8 902 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 GPR139Q6DWJ6 353 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF770Q6IQ21 691 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 KCTD18Q6PI47 426 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 DRAM2Q6UX65 266 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 LCNL1Q6ZST4 164 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 PRSS45Q7RTY3 260 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZBTB46Q86UZ6 589 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 OFCC1Q8IZS5 231 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR2AJ1Q8NGZ0 328 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 SPTSSAQ969W0 71 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF488Q96MN9 340 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 TM2D3Q9BRN9 247 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 RPRD1BQ9NQG5 326 aaKnown RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZMAT5Q9UDW3 170 aaKnown RBP6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 LINC00527Q9UJ94 153 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 BAG5Q9UL15 447 aa6.67□□□□□ -1.34
HMGB1P39-201ENST00000366304 TVP23AA6NH52 213 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 SEC14L6B5MCN3 397 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 HCKP08631 526 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PGA5P0DJD9 388 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 IGHV1-8P0DP01 117 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 HIST1H1CP16403 213 aaKnown RBP6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 CRABP1P29762 137 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PYCR1P32322 319 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR3A4PP47883 348 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 CAPZA1P52907 286 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 STX1BP61266 288 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PRDX4Q13162 271 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 TRAM2Q15035 370 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 BAIAP2L2Q6UXY1 529 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF730Q6ZMV8 503 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 LHFPL2Q6ZUX7 228 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 VTCN1Q7Z7D3 282 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 WFDC3Q8IUB2 231 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 CYB561A3Q8NBI2 242 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR2T27Q8NH04 317 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR4K13Q8NH42 304 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 RASSF5Q8WWW0 418 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 REEP6Q96HR9 211 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 SLC25A33Q9BSK2 321 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PAPOLGQ9BWT3 736 aaKnown RBP6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 PAPOLBQ9NRJ5 636 aaKnown RBP6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 TBC1D23Q9NUY8 699 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 USE1Q9NZ43 259 aa6.66□□□□□ -1.34
HMGB1P39-201ENST00000366304 RFPL4AA6NLU0 287 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 ZNF850A8MQ14 1090 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 RFPL4AL1F8VTS6 287 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 PAX4O43316 350 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 MMP23AO75900 390 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 JTBO76095 146 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 GLRA1P23415 457 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 AZGP1P25311 298 aaKnown RBP6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 DDOSTP39656 456 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 OMPP47874 163 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 VEGFCP49767 419 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 OR12D2P58182 307 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 SEC23BQ15437 767 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 C9orf152Q5JTZ5 239 aa6.65□□□□□ -1.34
HMGB1P39-201ENST00000366304 UTF1Q5T230 341 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms