RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 A0A0B4J2A0 478 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 MMP15P51511 669 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 SSBP1Q04837 148 aaKnown RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 FAM214BQ7L5A3 538 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 CCDC190Q86UF4 302 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 DRAXINQ8NBI3 349 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR5V1Q9UGF6 321 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ZNF354AO60765 605 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 SPINK2P20155 84 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR3A4PP47883 348 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 RAB11AP62491 216 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 GNB2P62879 340 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 CCDC71Q8IV32 467 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 TMEM217Q8N7C4 229 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 LRRC29Q8WV35 223 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ZNF436Q9C0F3 470 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 PTHLHP12272 177 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 KITLGP21583 273 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 CLINT1Q14677 625 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OXA1LQ15070 435 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ZNF239Q16600 458 aaKnown RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 RSPO4Q2I0M5 234 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR52W1Q6IF63 320 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 INO80CQ6PI98 192 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR5T1Q8NG75 326 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 CNTD2Q9H8S5 307 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 RNF150Q9ULK6 438 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OSGIN2Q9Y236 505 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ST8SIA3O43173 380 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 NKX2-1P43699 371 aaPredicted RBP12.23□□□□□ -0.45
CTR9-201ENST00000361367 MMP16P51512 607 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 HNF4GQ14541 408 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 POU4F3Q15319 338 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 SSX9Q7RTT3 188 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 OR4S1Q8NGB4 309 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 ST8SIA4Q92187 359 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
CTR9-201ENST00000361367 TMEM272A0A1B0GTI8 110 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 AHRRA9YTQ3 701 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 NCCRP1Q6ZVX7 275 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 UBALD1Q8TB05 177 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 NYNRINQ9P2P1 1898 aaKnown RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 RECKO95980 971 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 NGFP01138 241 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 HOXD4P09016 255 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 FDCSPQ8NFU4 85 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 NARFLQ9H6Q4 476 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 PI4KAP42356 2102 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 SPTAN1Q13813 2472 aaKnown RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 BTBD17A6NE02 478 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 TGFBR3LH3BV60 316 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 TBX6O95947 436 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 ATF4P18848 351 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 ASB5Q8WWX0 329 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
CTR9-201ENST00000361367 DOCK8Q8NF50 2099 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
CTR9-201ENST00000361367 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 AKR7A2O43488 359 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 OPCMLQ14982 345 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 CATSPERDQ86XM0 798 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 RBMXL1Q96E39 390 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 SHARPINQ9H0F6 387 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 C3orf80F5H4A9 247 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 PPIHO43447 177 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 DEFA4P12838 97 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 CSRP1P21291 193 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 RPS27AP62979 156 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 UBA52P62987 128 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 S100A7AQ86SG5 101 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 OR10AC1Q8NH08 325 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 TERB2Q8NHR7 220 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 PDCD6O75340 191 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 SEMG1P04279 462 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 SCAND1P57086 179 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 TSC22D1Q15714 1073 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 GPX8Q8TED1 209 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 DLL4Q9NR61 685 aa12.21□□□□□ -0.45
CTR9-201ENST00000361367 LIN7CQ9NUP9 197 aaKnown RBP12.21□□□□□ -0.45
CTR9-201ENST00000361367 PIGPP57054 158 aa12.21□□□□□ -0.46
CTR9-201ENST00000361367 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.46
CTR9-201ENST00000361367 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms