RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CCL24O00175 119 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZNF737O75373 536 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZNF682O95780 498 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 HCKP08631 526 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 DBHP09172 617 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 PSG2P11465 335 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 SLC1A6P48664 564 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 CEBPDP49716 269 aaPredicted RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 KLF10Q13118 480 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 ASPHD1Q5U4P2 390 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 LGALS9CQ6DKI2 356 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZDHHC21Q8IVQ6 265 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 LYG1Q8N1E2 194 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 TMEM255BQ8WV15 326 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 GIMAP1Q8WWP7 306 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 SPTSSAQ969W0 71 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 NRIP2Q9BQI9 281 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 IKZF5Q9H5V7 419 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 C19orf12Q9NSK7 152 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 BAG5Q9UL15 447 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 B9D1Q9UPM9 204 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 LINC00312Q9Y6C7 94 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 NOTCH3Q9UM47 2321 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 RBMY1BA6NDE4 496 aaKnown RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 RBMY1EA6NEQ0 496 aaKnown RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 K7N7A8 449 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 IGLV1-40P01703 118 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 SHBGP04278 402 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 RBMY1DP0C7P1 496 aaKnown RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 CA6P23280 308 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 GRB2P62993 217 aaKnown RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 MRPS25P82663 173 aaKnown RBP4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 ST3GAL3Q11203 375 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 C6orf183Q5T699 404 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 EPGNQ6UW88 154 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR5AS1Q8N127 324 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 MNTQ99583 582 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 RTL8AQ9BWD3 113 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 TAS2R3Q9NYW6 316 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 VAPAQ9P0L0 249 aa4.66□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR5B21A6NL26 309 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 TRIM64CA6NLI5 447 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR2AT4A6NND4 320 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 RER1O15258 196 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 MED14OSP0DP75 135 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 ERICH5Q6P6B1 374 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 ACP7Q6ZNF0 438 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 SPATA24Q86W54 205 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 LSRQ86X29 649 aaPredicted RBP4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 DDB2Q92466 427 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 UBE2E2Q96LR5 201 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 CHID1Q9BWS9 393 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 MRPL22Q9NWU5 206 aaKnown RBP4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 ENPP5Q9UJA9 477 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 A0A1W2PPL8 197 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 CGB3P0DN86 165 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 CGB7P0DN87 165 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 GP9P14770 177 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 CTAG1AP78358 180 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 SNAI3Q3KNW1 292 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 ASRGL1Q7L266 308 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 MRPL21Q7Z2W9 205 aaKnown RBP4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 ICA1LQ8NDH6 482 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR8J3Q8NGG0 315 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 SLCO4A1Q96BD0 722 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 PKIBQ9C010 78 aa4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.66
CDC42SE2-201ENST00000360515 A0A0U1RQV5 110 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 A0A1W2PRQ8 180 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 BLOC1S5-TXNDC5H3BN57 136 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 M0R135 149 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 BHLHE40O14503 412 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 SNRNP70P08621 437 aaKnown RBP4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 OR8U8P0C7N1 319 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 CD47Q08722 323 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 BNIP1Q12981 228 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 KRR1Q13601 381 aaKnown RBP4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 CYLC2Q14093 348 aaPredicted RBP4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 DGCR6Q14129 220 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 CENPVQ7Z7K6 275 aaPredicted RBP4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 OR8H1Q8NGG4 311 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 OR5A2Q8NGI9 324 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 SPRYD4Q8WW59 207 aaPredicted RBP4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 HPSE2Q8WWQ2 592 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 AQP3Q92482 292 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 ZNF799Q96GE5 643 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 OR8B4Q96RC9 309 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 PALMDQ9NP74 551 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 AP3M1Q9Y2T2 418 aa4.65□□□□□ -1.67
CDC42SE2-201ENST00000360515 CPSF4LA6NMK7 179 aaKnown RBP4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 NDUFB2O95178 105 aa4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 HLA-DPB1P04440 258 aa4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 CSN2P05814 226 aa4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 OMPP47874 163 aa4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 ZNF816Q0VGE8 651 aaPredicted RBP4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 SF3A3Q12874 501 aaKnown RBP eCLIP4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 GALEQ14376 348 aa4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 KPNB1Q14974 876 aaKnown RBP4.64□□□□□ -1.67
CDC42SE2-201ENST00000360515 LY6EQ16553 131 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms