RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZGLP1P0C6A0 271 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 IGSF11Q5DX21 431 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 HELTA6NFD8 242 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF716A6NP11 495 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 PLRG1O43660 514 aaKnown RBP14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ACAA2P42765 397 aaKnown RBP14.38□□□□□ -0.11
COL18A1-203ENST00000359759 DUSP21Q9H596 190 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 LRRC10Q5BKY1 277 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ST8SIA1Q92185 356 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 FAM210BQ96KR6 192 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ARID1BQ8NFD5 2236 aaPredicted RBP14.38□□□□□ -0.11
COL18A1-203ENST00000359759 NAT1P18440 290 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 CEACAM16Q2WEN9 425 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 FAHD1Q6P587 224 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 HSD17B10Q99714 261 aaKnown RBP14.38□□□□□ -0.11
COL18A1-203ENST00000359759 PSG11Q9UQ72 335 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 THBS4P35443 961 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 TCL1AP56279 114 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 PPP1R1AQ13522 171 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 CAMKMTQ7Z624 323 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 MUC20Q8N307 709 aaPredicted RBP14.38□□□□□ -0.11
COL18A1-203ENST00000359759 CYB5R1Q9UHQ9 305 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 NDUFB3O43676 98 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 TNFSF15O95150 251 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 SLC6A12P48065 614 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 RAB32Q13637 225 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 VMA21Q3ZAQ7 101 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ABI3BPQ7Z7G0 1075 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 FBXL14Q8N1E6 418 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 OR1B1Q8NGR6 318 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 ELOVL1Q9BW60 279 aa14.38□□□□□ -0.11
COL18A1-203ENST00000359759 MAP1LC3B2A6NCE7 125 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 PRRT4C9JH25 899 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 CDC14BO60729 498 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 ORM2P19652 201 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 PGFP49763 221 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 TPBGQ13641 420 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF260Q3ZCT1 412 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 CLLU1Q5K131 121 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 LYG1Q8N1E2 194 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 MRGPRX4Q96LA9 322 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 MAP1LC3BQ9GZQ8 125 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 ERRFI1Q9UJM3 462 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-203ENST00000359759 FRG2CA6NGY1 282 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 FAM87AP0C7U9 286 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 GFERP55789 205 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 C3orf85A0A1B0GTC6 90 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 CST4P01036 141 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 CD96P40200 585 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 LYZP61626 148 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 INPP5JQ15735 1006 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-203ENST00000359759 Q3ZCU0 254 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 FDX2Q6P4F2 183 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 SEZ6L2Q6UXD5 910 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 KISS1RQ969F8 398 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-203ENST00000359759 LPAR5Q9H1C0 372 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 SRD5A3Q9H8P0 318 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 IL17BQ9UHF5 180 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 SPCS3P61009 180 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 ZNF77Q15935 545 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 CALHM3Q86XJ0 350 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 KCNK15Q9H427 330 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 C9orf170A2RU37 121 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 DNASE2O00115 360 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-203ENST00000359759 IGHA1P01876 353 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 IGHA2P01877 340 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 ARG1P05089 322 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 PRSS1P07477 247 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 HTN1P15515 57 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 OR3A4PP47883 348 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 LSM11P83369 360 aaKnown RBP eCLIP14.37□□□□□ -0.112e-8■■□□□ 11.5
COL18A1-203ENST00000359759 ZNF576Q9H609 170 aa14.37□□□□□ -0.11
COL18A1-203ENST00000359759 TNFRSF10CO14798 259 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 PPP2CBP62714 309 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 PPP2CAP67775 309 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM116Q8NCL8 245 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 RFESDQ8TAC1 157 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM140Q9NV12 185 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 SERTM1A2A2V5 107 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 SHISA7A6NL88 538 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 SERPINE3A8MV23 424 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM215Q68D42 235 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 C6orf201Q7Z4U5 140 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 OR5A2Q8NGI9 324 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 CA6P23280 308 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 SP1P08047 785 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 LINC00299Q6ZSB3 139 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 AKIRIN1Q9H9L7 192 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-203ENST00000359759 GON4LQ3T8J9 2241 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 TCRBV5S1A1TA0A578 114 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 DHHO43323 396 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 CCL2P13500 99 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 FMODQ06828 376 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 CTF1Q16619 201 aa14.36□□□□□ -0.11
COL18A1-203ENST00000359759 LILRB1Q8NHL6 650 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms