RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CXCL1P09341 107 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 FABP4P15090 132 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 CTLA4P16410 223 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 ACKR1Q16570 336 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 FNDC7Q5VTL7 733 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 C1QL3Q5VWW1 255 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 OR10AD1Q8NGE0 317 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 RAB39BQ96DA2 213 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 PISDQ9UG56 409 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 SRPK3Q9UPE1 567 aa13.17□□□□□ -0.3
UBAP1-202ENST00000359544 MPDZO75970 2070 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 A0A1W2PP55 124 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 MASP2O00187 686 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-202ENST00000359544 FHITP49789 147 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 CD226Q15762 336 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-202ENST00000359544 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 AKR1C8PQ5T2L2 129 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 GPR157Q5UAW9 335 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 OR2T2Q6IF00 324 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 DEGS2Q6QHC5 323 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 OR5D14Q8NGL3 314 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 FSCN3Q9NQT6 498 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 SLCO1B1Q9Y6L6 691 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 TRAV36DV7A0A075B6V5 113 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 ZNF727A8MUV8 499 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 HRKO00198 91 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 SCDO00767 359 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 ZNF823P16415 610 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 SERPINA2P20848 420 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 ZNF93P35789 620 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-202ENST00000359544 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 PDZD11Q5EBL8 140 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 RTN4RL2Q86UN3 420 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-202ENST00000359544 KCNG3Q8TAE7 436 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-202ENST00000359544 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 PTGES2Q9H7Z7 377 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 EHFQ9NZC4 300 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
UBAP1-202ENST00000359544 A0A0A6YYD4 124 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 PATE3B3GLJ2 98 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CYB5BO43169 146 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 MPIG6BO95866 241 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 SFTPCP11686 197 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 FGF7P21781 194 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 PTGER4P35408 488 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
UBAP1-202ENST00000359544 RNF4P78317 190 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 SGCGQ13326 291 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CST6Q15828 149 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 SGCBQ16585 318 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 GFI1BQ5VTD9 330 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 SGPP2Q8IWX5 399 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CSNK2A3Q8NEV1 391 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 OR8G5Q8NG78 346 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 TCEAL2Q9H3H9 227 aaPredicted RBP13.15□□□□□ -0.3
UBAP1-202ENST00000359544 PRODH2Q9UF12 536 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 TBC1D29Q9UFV1 150 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 TCFL5Q9UL49 500 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 SCGB1D2O95969 90 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 MT-ATP6P00846 226 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 KNG1P01042 644 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 TRGC2P03986 189 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 PPP1CCP36873 323 aaKnown RBP13.15□□□□□ -0.3
UBAP1-202ENST00000359544 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 TMEM156Q8N614 296 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 C16orf52Q8NHV5 167 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 WDR92Q96MX6 357 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 OR2M4Q96R27 311 aa13.15□□□□□ -0.3
UBAP1-202ENST00000359544 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
UBAP1-202ENST00000359544 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 K7N7A8 449 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 SOCS1O15524 211 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 H2BFMP0C1H6 154 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 MMP16P51512 607 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 NHLH2Q02577 135 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 PCK2Q16822 640 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 GGNBP1Q5YKI7 109 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 GLIPR1L1Q6UWM5 242 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 AVL9Q8NBF6 648 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 DGAT2Q96PD7 388 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 TWSG1Q9GZX9 223 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms