RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 NXPH3O95157 252 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SERPINE2P07093 398 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 TAGLN2P37802 199 aaKnown RBP10.87□□□□□ -0.67
COL20A1-201ENST00000358894 IKZF1Q13422 519 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OVCH2Q7RTZ1 564 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 CMTM1Q8IZ96 169 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 MED19A0JLT2 244 aaPredicted RBP10.87□□□□□ -0.67
COL20A1-201ENST00000358894 ADAP1O75689 374 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SCAF4O95104 1147 aaKnown RBP10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OR5H8P0DN80 308 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 HIST1H1DP16402 221 aaKnown RBP10.87□□□□□ -0.67
COL20A1-201ENST00000358894 BTCP35070 178 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 LTBRP36941 435 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 Q6ZRG5 221 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 DTWD2Q8NBA8 298 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SLC38A9Q8NBW4 561 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 HAS2Q92819 552 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 PCED1AQ9H1Q7 454 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OCIAD1Q9NX40 245 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 IGHV3-64DA0A0J9YX35 117 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 A0A1W2PPC1 479 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 C9orf170A2RU37 121 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 BCL2L11O43521 198 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OR2C1O95371 312 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SKA3Q8IX90 412 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OR5M9Q8NGP3 310 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 UCK1Q9HA47 277 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 IGLV1-36A0A0B4J1U3 117 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 TMEM218A2RU14 115 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 TRAPPC2LH3BP13 241 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 VSIG8P0DPA2 414 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 EPHA8P29322 1005 aaPredicted RBP10.87□□□□□ -0.67
COL20A1-201ENST00000358894 CYB5R2Q6BCY4 276 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SLC25A45Q8N413 288 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OR51F2Q8NH61 342 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 OIT3Q8WWZ8 545 aa10.87□□□□□ -0.67
COL20A1-201ENST00000358894 H3BMH7 237 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 TBPP20226 339 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 FKBP2P26885 142 aaKnown RBP10.86□□□□□ -0.67
COL20A1-201ENST00000358894 SP6Q3SY56 376 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 OR5M8Q8NGP6 311 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 RTN4RQ9BZR6 473 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 OPA3Q9H6K4 179 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 RHOFQ9HBH0 211 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 A0A087X0M5 115 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 A0A1B0GX30 115 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 UMAD1C9J7I0 102 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 EIF3GO75821 320 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL20A1-201ENST00000358894 IGKV3-11P04433 115 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 GLRA1P23415 457 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 APLNRP35414 380 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 UBE2NP61088 152 aaKnown RBP10.86□□□□□ -0.67
COL20A1-201ENST00000358894 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 LINC00114Q6XXX2 140 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 C6orf201Q7Z4U5 140 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 REEP6Q96HR9 211 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 SPIN2AQ99865 258 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 SPIN2BQ9BPZ2 258 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 TAF9BQ9HBM6 251 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 A0A1W2PP11 408 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 ANKRD30BLA7E2S9 258 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 HMSDA8MTL9 139 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 IFNA5P01569 189 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 TTRP02766 147 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 IFI6P09912 130 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 MMP16P51512 607 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 WIPI1Q5MNZ9 446 aaPredicted RBP10.86□□□□□ -0.67
COL20A1-201ENST00000358894 ARHGEF39Q8N4T4 335 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 CLEC1AQ8NC01 280 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 OR1S1Q8NH92 325 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 NINJ1Q92982 152 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 KLHDC3Q9BQ90 382 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
COL20A1-201ENST00000358894 KPTNQ9Y664 436 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 DENND4CQ5VZ89 1909 aa10.86□□□□□ -0.67
COL20A1-201ENST00000358894 KCNAB3O43448 404 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 AQP8O94778 261 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 NRASP01111 189 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 ARG1P05089 322 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 RNF224P0DH78 156 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 NFYBP25208 207 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 ZNF133P52736 654 aaPredicted RBP10.85□□□□□ -0.67
COL20A1-201ENST00000358894 ECH1Q13011 328 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 MRPL49Q13405 166 aaKnown RBP10.85□□□□□ -0.67
COL20A1-201ENST00000358894 GUCA2BQ16661 112 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 ETFRF1Q6IPR1 90 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 ARRDC1Q8N5I2 433 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 THOC3Q96J01 351 aaKnown RBP10.85□□□□□ -0.67
COL20A1-201ENST00000358894 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
COL20A1-201ENST00000358894 PLXNB3Q9ULL4 1909 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms