RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CTRB2Q6GPI1 263 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 C6orf201Q7Z4U5 140 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 TM2D1Q9BX74 207 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 REG4Q9BYZ8 158 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF701Q9NV72 531 aaPredicted RBP13.81□□□□□ -0.2
PHTF1-201ENST00000357783 A0A0D9SG52 128 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 SPRY1O43609 319 aaPredicted RBP13.81□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 SERPINF1P36955 418 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 PSG4Q00888 419 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 TMEM128Q5BJH2 165 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 PXDC1Q5TGL8 231 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 PLXDC2Q6UX71 529 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 KCNRGQ8N5I3 272 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 RELL2Q8NC24 303 aaPredicted RBP13.81□□□□□ -0.2
PHTF1-201ENST00000357783 NAXEQ8NCW5 288 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 CCDC54Q8NEL0 328 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 ST8SIA2Q92186 375 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 WDR13Q9H1Z4 485 aa13.81□□□□□ -0.2
PHTF1-201ENST00000357783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHTF1-201ENST00000357783 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 OR6C6A6NF89 314 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 CNR1P21554 472 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 GFRA1P56159 465 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 SRYQ05066 204 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 JMJD6Q6NYC1 403 aaPredicted RBP13.8□□□□□ -0.2
PHTF1-201ENST00000357783 GPR35Q9HC97 309 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 MBD2Q9UBB5 411 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 FREM1Q5H8C1 2179 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 A0A1W2PNU3 283 aaPredicted RBP13.8□□□□□ -0.2
PHTF1-201ENST00000357783 MFSD2BA6NFX1 497 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 SERPINE3A8MV23 424 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 KCNAB3O43448 404 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 TAS2R46P59540 309 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 OR5M9Q8NGP3 310 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 HDHD3Q9BSH5 251 aaPredicted RBP13.8□□□□□ -0.2
PHTF1-201ENST00000357783 DDA1Q9BW61 102 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 HES7Q9BYE0 225 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 OR2H1Q9GZK4 316 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 WNT5BQ9H1J7 359 aa13.8□□□□□ -0.2
PHTF1-201ENST00000357783 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
PHTF1-201ENST00000357783 BOKQ9UMX3 212 aaPredicted RBP13.8□□□□□ -0.2
PHTF1-201ENST00000357783 IGKV1-27A0A075B6S5 117 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 RNF222A6NCQ9 220 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 DBX1A6NMT0 343 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 FPR2P25090 351 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 UBA52P62987 128 aaKnown RBP13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CHRFAM7AQ494W8 412 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 AADACL3Q5VUY0 350 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 TMEM17Q86X19 198 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.79□□□□□ -0.2
PHTF1-201ENST00000357783 THAP6Q8TBB0 222 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CPNE4Q96A23 557 aaPredicted RBP13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SIGLEC12Q96PQ1 595 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SPRY4Q9C004 299 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 PPA2Q9H2U2 334 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 PLEKHJ1Q9NW61 149 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 TIMM10BQ9Y5J6 103 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CYTIPO60759 359 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 OR2F2O95006 317 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SERPINA5P05154 406 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CELA3AP09093 270 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 LUMP51884 338 aaPredicted RBP13.79□□□□□ -0.2
PHTF1-201ENST00000357783 OR2F1Q13607 317 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF345Q14585 488 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 RSU1Q15404 277 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 FAM74A1Q5RGS3 127 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 LHFPL1Q86WI0 220 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SULF2Q8IWU5 870 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SKA3Q8IX90 412 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 SPSB1Q96BD6 273 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 Q96M66 194 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF75AQ96N20 296 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 CDC6Q99741 560 aa13.79□□□□□ -0.2
PHTF1-201ENST00000357783 RTBDNQ9BSG5 229 aaPredicted RBP13.79□□□□□ -0.2
PHTF1-201ENST00000357783 IGKV1D-8A0A087WSZ0 117 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 CEACAM18A8MTB9 384 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 BCL2L11O43521 198 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 SFT2D2O95562 160 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 ACOT7LQ6ZUV0 252 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 ZBTB44Q8NCP5 570 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 TMEM185AQ8NFB2 350 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 OR5AP2Q8NGF4 316 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 METTL9Q9H1A3 318 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF581Q9P0T4 197 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 MRPS18CQ9Y3D5 142 aaKnown RBP13.78□□□□□ -0.2
PHTF1-201ENST00000357783 DHRS7CA6NNS2 312 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 ADAP1O75689 374 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 NEURL1O76050 574 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 CSTBP04080 98 aaKnown RBP13.78□□□□□ -0.2
PHTF1-201ENST00000357783 SP9P0CG40 484 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 GLRA1P23415 457 aa13.78□□□□□ -0.2
PHTF1-201ENST00000357783 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms