RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 AKR1C4P17516 323 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 CXADRP78310 365 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ZNF544Q6NX49 715 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 RAB11FIP2Q7L804 512 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 TMEM17Q86X19 198 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 OR5T2Q8NGG2 359 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 PPP1R14BQ96C90 147 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 AIF1LQ9BQI0 150 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 WWTR1Q9GZV5 400 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ZNF552Q9H707 407 aaPredicted RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 ZNF835Q9Y2P0 537 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 A0A0J9YW62 118 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 LOC107986453A0A1B0GWG9 222 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 CXorf65A6NEN9 183 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 APOA1P02647 267 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 CTRB1P17538 263 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ERP29P30040 261 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 ELOAQ14241 798 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 CTRB2Q6GPI1 263 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 MOB3CQ70IA8 216 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 LRRC28Q86X40 367 aaPredicted RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 TOMM5Q8N4H5 51 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 STPG3Q8N7X2 389 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 SPERTQ8NA61 448 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 NABP1Q96AH0 204 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 CCDC74BQ96LY2 380 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ZFYVE21Q9BQ24 234 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 PELOQ9BRX2 385 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 GHRLQ9UBU3 117 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 MMP23AO75900 390 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 KRT8P05787 483 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 SCTP09683 121 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 NSDHLQ15738 373 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 MAJINQ3KP22 176 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 SGMS2Q8NHU3 365 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 LMX1AQ8TE12 382 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ITLN1Q8WWA0 313 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 SIGLEC12Q96PQ1 595 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 RBM24Q9BX46 236 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 SLC26A1Q9H2B4 701 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 NELFAQ9H3P2 528 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 TP53TG3Q9ULZ0 132 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 ARRDC5A6NEK1 342 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 WNT9BO14905 357 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 SYT7O43581 403 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 H2AFB2P0C5Z0 115 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 NME2P22392 152 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 RPL4P36578 427 aaKnown RBP4.78□□□□□ -1.65
CD47-201ENST00000355354 HSD17B2P37059 387 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 ALG10Q5BKT4 473 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 LDLRAD2Q5SZI1 272 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 SPSB3Q6PJ21 355 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 KCTD9Q7L273 389 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 ST6GALNAC3Q8NDV1 305 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 OTOSQ8NHW6 89 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 SLC38A3Q99624 504 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 GPR61Q9BZJ8 451 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 B3GALT1Q9Y5Z6 326 aa4.78□□□□□ -1.65
CD47-201ENST00000355354 KMT2CQ8NEZ4 4911 aaKnown RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 IGLV3-12A0A075B6K2 115 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 GEMIN2O14893 280 aaKnown RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 RAB40ALP0C0E4 278 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 AKT2P31751 481 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 CREB3L2Q70SY1 520 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 OVCH2Q7RTZ1 564 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 OR10V1Q8NGI7 309 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 OR1L1Q8NH94 360 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 PAQR8Q8TEZ7 354 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 DACT3Q96B18 629 aaPredicted RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 LRRC46Q96FV0 321 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 AKR1E2Q96JD6 320 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 DPYSL5Q9BPU6 564 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 MED18Q9BUE0 208 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 MTHFD2LQ9H903 347 aaPredicted RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 SERINC1Q9NRX5 453 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 CKLFQ9UBR5 152 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 UNC119BA6NIH7 251 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 GPR89AB7ZAQ6 455 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 C5orf58C9J3I9 102 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 C1QTNF3-AMACRE9PGA6 284 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 LY6HO94772 140 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 UBL3O95164 117 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 UTS2O95399 124 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 KNG1P01042 644 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 THBS1P07996 1170 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 CD14P08571 375 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 GPR89BP0CG08 455 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 VAMP1P23763 118 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 SH3BGRP55822 239 aaPredicted RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 KRR1Q13601 381 aaKnown RBP4.77□□□□□ -1.65
CD47-201ENST00000355354 SGCAQ16586 387 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 PHLDA2Q53GA4 152 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 TMEM69Q5SWH9 247 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 ZNF671Q8TAW3 534 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 NANPQ8TBE9 248 aa4.77□□□□□ -1.65
CD47-201ENST00000355354 TEX47Q8TBZ9 253 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms