RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GYPAP02724 150 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 DAOP14920 347 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 JMJD6Q6NYC1 403 aaPredicted RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 RAB33BQ9H082 229 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 IGHA1P01876 353 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5I1Q13606 314 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 LYSMD4Q5XG99 296 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 C1QTNF6Q9BXI9 259 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC2A8Q9NY64 477 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 RGPD8O14715 1765 aaPredicted RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 G3V3Y1 287 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 H0YIG0 161 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 OGG1O15527 345 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 HPP00738 406 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 CDKN3Q16667 212 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM78AQ5JUQ0 283 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC25A42Q86VD7 318 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR6C1Q96RD1 312 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 PLAC1Q9HBJ0 212 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 GPR37O15354 613 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 HAAOP46952 286 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 SUMO3P55854 103 aaPredicted RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 PCBP3P57721 371 aaKnown RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 BARX1Q9HBU1 254 aaPredicted RBP11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 LANCL2Q9NS86 450 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 DUSP13Q9UII6 198 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 KCNE1BA0A087WTH5 132 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAM74A7A6NL05 159 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR5AL1P0C617 328 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 C21orf58P58505 322 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 BADQ92934 168 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 HHIPQ96QV1 700 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 VN1R1Q9GZP7 353 aa11.4□□□□□ -0.59
SYNCRIP-201ENST00000355238 CTSDP07339 412 aaPredicted RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAHP16930 419 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 F2RP25116 425 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 NT5CQ8TCD5 201 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 CLDN23Q96B33 292 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 GALMQ96C23 342 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 ERVH48-1M5A8F1 160 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 TCF21O43680 179 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 LIMK1P53667 647 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 HLA-DRB5Q30154 266 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 DHRS7BQ6IAN0 325 aaPredicted RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 NOXO1Q8NFA2 376 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 CHAC2Q8WUX2 184 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 STARD4Q96DR4 205 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 TJP1Q07157 1748 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 CD99P14209 185 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 NUFIP2Q7Z417 695 aaKnown RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 C11orf40Q8WZ69 217 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 TBC1D29Q9UFV1 150 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 KCNE3Q9Y6H6 103 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 H3BQ15 152 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 CDK2AP1O14519 115 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 SEMG1P04279 462 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 HMGA1P17096 107 aaKnown RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 NAAAQ02083 359 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 DPPA3Q6W0C5 159 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 MBNL1Q9NR56 388 aaKnown RBP11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 AMDHD2Q9Y303 409 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 TIMM9Q9Y5J7 89 aa11.39□□□□□ -0.59
SYNCRIP-201ENST00000355238 A6NDN8 102 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 M0R2Z0 102 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 SLC37A2Q8TED4 501 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 FGF22Q9HCT0 170 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 MMP25Q9NPA2 562 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR5AC1P0C628 307 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 RUNX2Q13950 521 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 KISS1Q15726 138 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ATP5SQ99766 215 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 HCSTQ9UBK5 93 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 A0A1W2PNR3 127 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 DHHO43323 396 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 SNCGO76070 127 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 NMBP08949 121 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 PPOXP50336 477 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ADPRHL1Q8NDY3 354 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 POM121L2Q96KW2 1035 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 DECR2Q9NUI1 292 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 HDGFL3Q9Y3E1 203 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 TOPAZ1Q8N9V7 1692 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms