RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 EME1Q96AY2 570 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 C9orf16Q9BUW7 83 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 OR51V1Q9H2C8 321 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 SLC25A10Q9UBX3 287 aaPredicted RBP12.95□□□□□ -0.34
PDGFA-201ENST00000354513 FAM96BQ9Y3D0 163 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 MAB21L2Q9Y586 359 aa12.95□□□□□ -0.34
PDGFA-201ENST00000354513 NKX6-3A6NJ46 265 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 ANXA2P2A6NMY6 339 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 M0R1W7 72 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 LYNP07948 512 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 ACAA1P09110 424 aaPredicted RBP12.94□□□□□ -0.34
PDGFA-201ENST00000354513 CAV3P56539 151 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 EGR3Q06889 387 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 DMRTC1Q5HYR2 192 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 CRIP3Q6Q6R5 217 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 ZBTB49Q6ZSB9 765 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 CBR4Q8N4T8 237 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 PIGCQ92535 297 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 OTULINQ96BN8 352 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 RNF170Q96K19 258 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 NLKQ9UBE8 527 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 LRP12Q9Y561 859 aa12.94□□□□□ -0.34
PDGFA-201ENST00000354513 MEIOCA2RUB1 952 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 OR2AT4A6NND4 320 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 H3BN98 237 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 EI24O14681 340 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 IGLV3-1P01715 115 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 PSG2P11465 335 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 PAX6P26367 422 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 UBE2E1P51965 193 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 HCCSP53701 268 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 GINS1Q14691 196 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 LPCAT4Q643R3 524 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 SLC35E4Q6ICL7 350 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 BEND2Q8NDZ0 799 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 THEM6Q8WUY1 208 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 DNAJC9Q8WXX5 260 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 UBE2FQ969M7 185 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 OR51I2Q9H344 312 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 PAPOLBQ9NRJ5 636 aaKnown RBP12.93□□□□□ -0.34
PDGFA-201ENST00000354513 KRT84Q9NSB2 600 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 SIGLEC9Q9Y336 463 aa12.93□□□□□ -0.34
PDGFA-201ENST00000354513 H3BUX3 64 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 CASQ2O14958 399 aaPredicted RBP12.92□□□□□ -0.34
PDGFA-201ENST00000354513 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
PDGFA-201ENST00000354513 ALOX5APP20292 161 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
PDGFA-201ENST00000354513 PEX2P28328 305 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 TGFBR2P37173 567 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 GPM6AP51674 278 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 CDK5Q00535 292 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 SNCBQ16143 134 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 KDM4DQ6B0I6 523 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 ZNRF1Q8ND25 227 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 FAM110DQ8TAY7 271 aaPredicted RBP12.92□□□□□ -0.34
PDGFA-201ENST00000354513 RORBQ92753 470 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 SLC29A1Q99808 456 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 PPA2Q9H2U2 334 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 ABCB9Q9NP78 766 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 FAM206AQ9NX38 181 aa12.92□□□□□ -0.34
PDGFA-201ENST00000354513 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
PDGFA-201ENST00000354513 CCDC182A6NF36 153 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 PRR23D1E9PI22 279 aaPredicted RBP12.91□□□□□ -0.34
PDGFA-201ENST00000354513 PRODHO43272 600 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 ALPLP05186 524 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
PDGFA-201ENST00000354513 OSMP13725 252 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 NDUFB7P17568 137 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 GLRA1P23415 457 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 POU1F1P28069 291 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 EFNB2P52799 333 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 ACSM1Q08AH1 577 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 OGFRL1Q5TC84 451 aaPredicted RBP12.91□□□□□ -0.34
PDGFA-201ENST00000354513 CPOQ8IVL8 374 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 FTMTQ8N4E7 242 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 OR5R1Q8NH85 324 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 SDSLQ96GA7 329 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 MED30Q96HR3 178 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
PDGFA-201ENST00000354513 C19orf12Q9NSK7 152 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 FBLN5Q9UBX5 448 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
PDGFA-201ENST00000354513 A0A1W2PQ09 198 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 BTBD17A6NE02 478 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 ZNF732B4DXR9 585 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms