RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TMEM231Q9H6L2 316 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 PRR13Q9NZ81 148 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 MLXQ9UH92 298 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 A0A0A6YYD4 124 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 A0A0J9YW62 118 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SYT7O43581 403 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 GFRA3O60609 400 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ADAP1O75689 374 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CBR3O75828 277 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 BPNT1O95861 308 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 FAM157CP0CG43 387 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SUCLG1P53597 346 aaKnown RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CTAG1AP78358 180 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 MICBQ29980 383 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ABHD17BQ5VST6 288 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 RAET1LQ5VY80 246 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 AWAT2Q6E213 333 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 H1FNTQ75WM6 255 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 FAM219AQ8IW50 185 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM104Q8NE00 496 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 FDCSPQ8NFU4 85 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 RNF141Q8WVD5 230 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 DDIT4LQ96D03 193 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 UCN2Q96RP3 112 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 UQCC2Q9BRT2 126 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 C5orf66Q9H5L9 145 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 WASF3Q9UPY6 502 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM14DPA8MWL7 114 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 NPIPA5E9PKD4 350 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TLX3O43711 291 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PVALBP20472 110 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 NTF4P34130 210 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF93P35789 620 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CX3CR1P49238 355 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 NAAAQ02083 359 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 STK11Q15831 433 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SGCAQ16586 387 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM128Q5BJH2 165 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PLAC9Q5JTB6 97 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 RNFT1Q5M7Z0 435 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF529Q6P280 563 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 MDS2Q8NDY4 140 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 OR2M7Q8NG81 312 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 OR10S1Q8NGN2 331 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM230Q96A57 120 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SLAMF6Q96DU3 332 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SRXN1Q9BYN0 137 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PBOV1Q9GZY1 135 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CHST11Q9NPF2 352 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 SERINC1Q9NRX5 453 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CARHSP1Q9Y2V2 147 aaKnown RBP7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PIEZO1Q92508 2521 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 CHD8Q9HCK8 2581 aa7.53□□□□□ -1.2
TRIM55-204ENST00000353317 PTPRQQ9UMZ3 2332 aa7.52□□□□□ -1.2
TRIM55-204ENST00000353317 DLL1O00548 723 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 PI3P19957 117 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 TBPP20226 339 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ADH6P28332 368 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 NPBWR1P48145 328 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 NPY4RP50391 375 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 CCL11P51671 97 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 AKR1D1P51857 326 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 H3F3AP84243 136 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 TLE3Q04726 772 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 MST1LQ2TV78 715 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 DHRS7BQ6IAN0 325 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-204ENST00000353317 DNM1P34Q6PK57 102 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 GALNTL5Q7Z4T8 443 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF101Q8IZC7 436 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 OR5D14Q8NGL3 314 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 C11orf40Q8WZ69 217 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 FER1L6-AS2Q96M78 137 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 SOX7Q9BT81 388 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ESRP2Q9H6T0 727 aaKnown RBP7.52□□□□□ -1.21
TRIM55-204ENST00000353317 OR5AC2Q9NZP5 309 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 KLHL13Q9P2N7 655 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 DKKL1Q9UK85 242 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 GPR132Q9UNW8 380 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 A0A1W2PP11 408 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 A6NIZ1 184 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 TNFSF11O14788 317 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 SOCS1O15524 211 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ABOP16442 354 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ANOS1P23352 680 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 HOXA1P49639 335 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-204ENST00000353317 GSK3AP49840 483 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 RAB13P51153 203 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 RAP1BP61224 184 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 RAP1AP62834 184 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
TRIM55-204ENST00000353317 HSF1Q00613 529 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ZP4Q12836 540 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms