RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SEMA6DQ8NFY4 1073 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 NELFAQ9H3P2 528 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 PARP11Q9NR21 331 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 MED12Q93074 2177 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 OR5H15A6NDH6 313 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 DHRS7CA6NNS2 312 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 F5H5K5 113 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 MSTNO14793 375 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 SERPINA5P05154 406 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 NFYBP25208 207 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 FKBP2P26885 142 aaKnown RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 RPL12P30050 165 aaKnown RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 OTX1P32242 354 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 CSNK1A1P48729 337 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 HIST1H3AP68431 136 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 RSPO1Q2MKA7 263 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 HIST2H3PS2Q5TEC6 136 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 HIST2H3AQ71DI3 136 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 C6orf201Q7Z4U5 140 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 FOXRED2Q8IWF2 684 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 FNDC9Q8TBE3 224 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 TMEM54Q969K7 222 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 NABP1Q96AH0 204 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 FBXL17Q9UF56 701 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 ASCC3Q8N3C0 2202 aaKnown RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 EML6Q6ZMW3 1958 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 FAM157AC9JC47 383 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 DEDDO75618 318 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 RPL35P42766 123 aaKnown RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF133P52736 654 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 PIGTQ969N2 578 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 S100A13Q99584 98 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF2Q9BSG1 426 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 CRB3Q9BUF7 120 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 ESRP2Q9H6T0 727 aaKnown RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 BIN3Q9NQY0 253 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 DECR2Q9NUI1 292 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 PIGLQ9Y2B2 252 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 CRYM-AS1A6NIL9 109 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 K7EPK0 472 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 FBXO24O75426 580 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 H3F3AP84243 136 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 PDZK1IP1Q13113 114 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 SULF2Q8IWU5 870 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 FAM71E2Q8N5Q1 922 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 RXFP4Q8TDU9 374 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 GLYATL2Q8WU03 294 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 Q96M66 194 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF576Q9H609 170 aa21.46■■□□□ 1.03
CPNE1-202ENST00000352393 CHCHD2Q9Y6H1 151 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-202ENST00000352393 MEX3AA1L020 520 aaKnown RBP21.45■■□□□ 1.02
CPNE1-202ENST00000352393 ONECUT2O95948 504 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 AFF3P51826 1226 aaKnown RBP21.45■■□□□ 1.02
CPNE1-202ENST00000352393 AKR1D1P51857 326 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 AVPI1Q5T686 147 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 GALNTL5Q7Z4T8 443 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 SGPP2Q8IWX5 399 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 AMDHD2Q9Y303 409 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 PCDHGA1Q9Y5H4 931 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 POMT1Q9Y6A1 747 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 MTCH2Q9Y6C9 303 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 CABIN1Q9Y6J0 2220 aa21.45■■□□□ 1.02
CPNE1-202ENST00000352393 CRYBA1P05813 215 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 CTAG1AP78358 180 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 SKA3Q8IX90 412 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 C10orf35Q96D05 121 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 HDHD3Q9BSH5 251 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-202ENST00000352393 ELL3Q9HB65 397 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-202ENST00000352393 BCAT2O15382 392 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-202ENST00000352393 SPP1P10451 314 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 FCGR2CP31995 323 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 F2RL1P55085 397 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 PRAMEF20Q5VT98 475 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 LCN10Q6JVE6 187 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 DNASE2BQ8WZ79 361 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 PRRX2Q99811 253 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 DEFB126Q9BYW3 111 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 COA4Q9NYJ1 87 aa21.44■■□□□ 1.02
CPNE1-202ENST00000352393 PQLC2LA1A4F0 135 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 C9JQL5 133 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 JTBO76095 146 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 GABRR1P24046 479 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 GUCA1AP43080 201 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-202ENST00000352393 SHBQ15464 509 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 GGNBP1Q5YKI7 109 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 OPN5Q6U736 354 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 CCDC54Q8NEL0 328 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 LYPD6BQ8NI32 183 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 MRPL24Q96A35 216 aaKnown RBP21.43■■□□□ 1.02
CPNE1-202ENST00000352393 PIGQQ9BRB3 760 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 RARRES3Q9UL19 164 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 CD63P08962 238 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 SMCO1Q147U7 214 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 RPUSD3Q6P087 351 aaKnown RBP21.43■■□□□ 1.02
CPNE1-202ENST00000352393 Q6ZRG5 221 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 PLEKHJ1Q9NW61 149 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 C19orf25Q9UFG5 118 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-202ENST00000352393 ANXA10Q9UJ72 324 aa21.43■■□□□ 1.02
CPNE1-202ENST00000352393 M0R135 149 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms