RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SLC22A6Q4U2R8 563 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 DMRTC1Q5HYR2 192 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 RPUSD3Q6P087 351 aaKnown RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 FAM214BQ7L5A3 538 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 TRAPPC6BQ86SZ2 158 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CCDC36Q8IYA8 594 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 SPICQ8N5J4 248 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 BEST4Q8NFU0 473 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 OR5D18Q8NGL1 313 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 OR13C8Q8NGS7 320 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 ZFAND1Q8TCF1 268 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 NPRL2Q8WTW4 380 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 NUDCD2Q8WVJ2 157 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CPNE2Q96FN4 548 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 WBP1Q96G27 269 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 Q96M66 194 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 SLC6A7Q99884 636 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 OCSTAMPQ9BR26 566 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 SEC22CQ9BRL7 303 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 GINS4Q9BRT9 223 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 TINAGL1Q9GZM7 467 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 OPA3Q9H6K4 179 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 KCNN3Q9UGI6 736 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 IGKV1-12A0A0C4DH73 117 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PQLC2LA1A4F0 135 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 C5orf49A4QMS7 147 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 FIGNL2A6NMB9 653 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CEACAM18A8MTB9 384 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SERPINE3A8MV23 424 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 DISC1C4P0D8 188 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 G3V3Q6 166 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 J3QW42 95 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 M0QYG6 137 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 FABP7O15540 132 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF780AO75290 641 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 IGKV1D-12P01611 117 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PDGFAP04085 211 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 TMEM225BP0DP42 221 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CD79AP11912 226 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 COX5AP20674 150 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 IGHV1-2P23083 117 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CPT2P23786 658 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 WNT5AP41221 380 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 KIR2DL2P43627 348 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 RBP2P50120 134 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ATP1B3P54709 279 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PRSS12P56730 875 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 GNG2P59768 71 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PLP2Q04941 152 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PDZK1IP1Q13113 114 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 GK2Q14410 553 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CDK10Q15131 360 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 KRTAP21-3Q3LHN1 58 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ACSF3Q4G176 576 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 HIKESHIQ53FT3 197 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ACTBL2Q562R1 376 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 Q5BKY6 102 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 RNASE10Q5GAN6 216 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 VAX1Q5SQQ9 334 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ATPAF1Q5TC12 328 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 NSUN5P2Q63ZY6 315 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SIGIRRQ6IA17 410 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 LAMTOR1Q6IAA8 161 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 MOB3CQ70IA8 216 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 P4HA3Q7Z4N8 544 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 HOGA1Q86XE5 327 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SAXO1Q8IYX7 474 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 BPIFB2Q8N4F0 458 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 GVQW1Q8N7I0 195 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 RBMXL3Q8N7X1 1067 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 C9orf106Q8NAJ2 232 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ZSCAN4Q8NAM6 433 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 C1orf162Q8NEQ5 155 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CSNK2A3Q8NEV1 391 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 OR4S1Q8NGB4 309 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 OR56B2PQ8NGI1 322 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 OR51T1Q8NGJ9 327 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 OR8S1Q8NH09 359 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SNIP1Q8TAD8 396 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 NANOS1Q8WY41 292 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SNAPC3Q92966 411 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 FBXW5Q969U6 566 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 MRGPRFQ96AM1 343 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 MRPS24Q96EL2 167 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 BORCS8Q96FH0 119 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 ARHGAP5-AS1Q96IT6 56 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CYYR1Q96J86 154 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 HYLS1Q96M11 299 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 BBC3Q96PG8 261 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 TRIB1Q96RU8 372 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PRRT1Q99946 306 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PECRQ9BY49 303 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 FGF23Q9GZV9 251 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 METTL9Q9H1A3 318 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 C12orf49Q9H741 205 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 BEX1Q9HBH7 125 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 GPN1Q9HCN4 374 aaPredicted RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 DLL4Q9NR61 685 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 PIPOXQ9P0Z9 390 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SCP2D1Q9UJQ7 156 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms