RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZFAND2BQ8WV99 257 aa10.65□□□□□ -0.7
TRAF3-201ENST00000347662 MAP1LC3CQ9BXW4 147 aa10.65□□□□□ -0.7
TRAF3-201ENST00000347662 GDF2Q9UK05 429 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-201ENST00000347662 ING1Q9UK53 422 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-201ENST00000347662 LOC389332A0A1B0GUA5 103 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 HCCSP53701 268 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 FBXO27Q8NI29 283 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 FLYWCH2Q96CP2 140 aaKnown RBP10.65□□□□□ -0.71
TRAF3-201ENST00000347662 TP53RKQ96S44 253 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 NDUFB11Q9NX14 153 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 ZNF346Q9UL40 294 aaKnown RBP10.65□□□□□ -0.71
TRAF3-201ENST00000347662 CORINQ9Y5Q5 1042 aa10.65□□□□□ -0.71
TRAF3-201ENST00000347662 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 DYRK2Q92630 601 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 GON7Q9BXV9 100 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 ZNFX1Q9P2E3 1918 aaKnown RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 TRBV23-1A0A0A0MS06 115 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 EMX1Q04741 257 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 RPEL1Q2QD12 228 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 KLHDC8BQ8IXV7 354 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 ZNF738Q8NE65 137 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 VSIG4Q9Y279 399 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 CCDC187A0A096LP49 1063 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 CTDSP2O14595 271 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 TMEM183BQ1AE95 376 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 TMEM52BQ4KMG9 183 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 METRNLQ641Q3 311 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 SYT11Q9BT88 431 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 LPAR2Q9HBW0 351 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 CACNA1IQ9P0X4 2223 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 KLF7O75840 302 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 KRASP01116 189 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 APELAP0DMC3 54 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 CR2P20023 1033 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 APOBEC1P41238 236 aaKnown RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 FOXK2Q01167 660 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 COL19A1Q14993 1142 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 EAF1Q96JC9 268 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 SLC25A21Q9BQT8 299 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 B4GALT3O60512 393 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 TNFRSF1AP19438 455 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 OR1C1Q15619 314 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 MICBQ29980 383 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 ZNF502Q8TBZ5 544 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 PELI1Q96FA3 418 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 IGLV3-10A0A075B6K4 115 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 E5RGE8 158 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 MRPS14O60783 128 aaKnown RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 PYCR3Q53H96 274 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 OR52I1Q8NGK6 324 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 ZNF71Q9NQZ8 489 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-201ENST00000347662 NSG2Q9Y328 171 aa10.64□□□□□ -0.71
TRAF3-201ENST00000347662 RPL12P30050 165 aaKnown RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CALCRP30988 508 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 DEFB124Q8NES8 71 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 FAM210BQ96KR6 192 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 A0A1B0GWA3 101 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 RELBQ01201 579 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 C6orf201Q7Z4U5 140 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CHST8Q9H2A9 424 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 IL36GQ9NZH8 169 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 TAAR5O14804 337 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 SNNO75324 88 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 TFPI2P48307 235 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 RELAQ04206 551 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 AQP10Q96PS8 301 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 KIR3DX1Q9H7L2 352 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CRYABP02511 175 aaKnown RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CLDN15P56746 228 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 OR2F1Q13607 317 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 PMS2P11Q13670 270 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 HERPUD1Q15011 391 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 BCDIN3DQ7Z5W3 292 aaKnown RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CLDN23Q96B33 292 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 NPAS1Q99742 590 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 RPL27P61353 136 aaKnown RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 SRSF5Q13243 272 aaKnown RBP10.63□□□□□ -0.71
TRAF3-201ENST00000347662 ZNF66Q6ZN08 573 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 SLAMF6Q96DU3 332 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 C20orf141Q9NUB4 165 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 FCN1O00602 326 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 LMX1BO60663 402 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 FCGR3BO75015 233 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 DHRS3O75911 302 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 ID4P47928 161 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 PNLIPRP2P54317 469 aa10.63□□□□□ -0.71
TRAF3-201ENST00000347662 CD226Q15762 336 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms