RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 KIR2DS4P43632 304 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 DSCR4P56555 118 aaPredicted RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 KIR2DS1Q14954 304 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 ADAD2Q8NCV1 583 aaKnown RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 DNASE2BQ8WZ79 361 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 INTS12Q96CB8 462 aaKnown RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 SUCNR1Q9BXA5 334 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 DOCK4Q8N1I0 1966 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 PRRG2O14669 202 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 RER1O15258 196 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 TXNDC12O95881 172 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 PTGFRP43088 359 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 H2BFSP57053 126 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 SNRPEP62304 92 aaKnown RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 RAB11AP62491 216 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 SLC39A9Q9NUM3 307 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 PTPMT1Q8WUK0 201 aaPredicted RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 ZNF845Q96IR2 970 aaPredicted RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 CALHM2Q9HA72 323 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 C21orf140B9A014 251 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 SPRY1O43609 319 aaPredicted RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 IFI6P09912 130 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 DEFB109BQ30KR1 87 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 PIK3IP1Q96FE7 263 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 FAM173AQ9BQD7 235 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 P4HTMQ9NXG6 502 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 OR14J1Q9UGF5 321 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 TRBV5-7A0A0A0MS05 114 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 CRYABP02511 175 aaKnown RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 GAS1P54826 345 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 ZNF239Q16600 458 aaKnown RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 HES3Q5TGS1 186 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 IGHV3-15A0A0B4J1V0 119 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 SERPINA7P05543 415 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 RPL7L1Q6DKI1 246 aaKnown RBP13.09□□□□□ -0.31
NUP50-201ENST00000347635 PTX4Q96A99 478 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 SSX3Q99909 188 aa13.09□□□□□ -0.31
NUP50-201ENST00000347635 FAM166BA8MTA8 275 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 OR2A4O95047 310 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 MEOX2P50222 304 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 C15orf54Q8N8G6 183 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 OR2A7Q96R45 310 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 MED9Q9NWA0 146 aa13.08□□□□□ -0.31
NUP50-201ENST00000347635 CCDC88CQ9P219 2028 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 CEBPZOSA8MTT3 80 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 DHHO43323 396 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 TUSC2O75896 110 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 ABHD16AO95870 558 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 EFNB1P98172 346 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
NUP50-201ENST00000347635 RAB39BQ96DA2 213 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 PRR13Q9NZ81 148 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 TRPM6Q9BX84 2022 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 PCM1Q15154 2024 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 FOXC1Q12948 553 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 OSR2Q8N2R0 312 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 M1APQ8TC57 530 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 FOXS1O43638 330 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 NUBPLQ8TB37 319 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 POMT1Q9Y6A1 747 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
NUP50-201ENST00000347635 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 B4E171 279 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 TO15178 435 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 HPP00738 406 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 NQO2P16083 231 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 FSTP19883 344 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 TSPAN7P41732 249 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 YRDCQ86U90 279 aaKnown RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 MRPL41Q8IXM3 137 aaKnown RBP13.07□□□□□ -0.32
NUP50-201ENST00000347635 OR56B2PQ8NGI1 322 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 MCHR2Q969V1 340 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 LPAR3Q9UBY5 353 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 DHRS3O75911 302 aa13.07□□□□□ -0.32
NUP50-201ENST00000347635 CLDN1O95832 211 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms