RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 INSM2Q96T92 566 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-201ENST00000345617 GLRA1P23415 457 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 SLC25A1P53007 311 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 FAM3AP98173 230 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM167BQ9NRX6 74 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 KLF7O75840 302 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-201ENST00000345617 IAPPP10997 89 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 SH2D2AQ9NP31 389 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM30CPA0ZSE6 113 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 THBS4P35443 961 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 OR1C1Q15619 314 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 BPIFA4PQ86YQ2 179 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 PHF3Q92576 2039 aaKnown RBP17.48■□□□□ 0.39
HDAC4-201ENST00000345617 OR2J2O76002 312 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 RGRP47804 291 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-201ENST00000345617 CD207Q9UJ71 328 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 PLPP2O43688 288 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM147Q9BVK8 224 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 RASL12Q9NYN1 266 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 OR2T8A6NH00 312 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 DPTQ07507 201 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 SHBQ15464 509 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF740Q8NDX6 193 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 OR5AU1Q8NGC0 362 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 PERPQ96FX8 193 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF766Q5HY98 468 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 APOBEC3DQ96AK3 386 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-201ENST00000345617 TNFRSF10CO14798 259 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 OR6C1Q96RD1 312 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 AKR7A3O95154 331 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 MARCH3Q86UD3 253 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 RBM45Q8IUH3 476 aaKnown RBP17.47■□□□□ 0.39
HDAC4-201ENST00000345617 LHFPL5Q8TAF8 219 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 UBE2FQ969M7 185 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 LRFN3Q9BTN0 628 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 CDCP1Q9H5V8 836 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 DUSP13Q9UII6 198 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 A0A1W2PNV4 684 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 TIMP1P01033 207 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 FAM87AP0C7U9 286 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 MORN4Q8NDC4 146 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 OR1L3Q8NH93 324 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 MTFP1Q9UDX5 166 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 PTGFRP43088 359 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 C9orf135Q5VTT2 229 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 VCX2Q9H322 139 aa17.47■□□□□ 0.39
HDAC4-201ENST00000345617 PRAMEF20Q5VT98 475 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 C5orf49A4QMS7 147 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 BVESQ8NE79 360 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 OPRM1P35372 400 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 LANCL2Q9NS86 450 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 GYPAP02724 150 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 FUT3P21217 361 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 EID2BQ96D98 161 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 SNX22Q96L94 193 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 IL21Q9HBE4 155 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 KLK8O60259 260 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 RPS16P62249 146 aaKnown RBP17.46■□□□□ 0.39
HDAC4-201ENST00000345617 SCGB1D4Q6XE38 83 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 POM121BA6NF01 834 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 CEBPBP17676 345 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 BHLHE23Q8NDY6 225 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 STXBP6Q8NFX7 210 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 DAPP1Q9UN19 280 aa17.46■□□□□ 0.39
HDAC4-201ENST00000345617 SDCBPO00560 298 aaPredicted RBP17.46■□□□□ 0.38
HDAC4-201ENST00000345617 HAAOP46952 286 aa17.46■□□□□ 0.38
HDAC4-201ENST00000345617 ACVR1Q04771 509 aa17.46■□□□□ 0.38
HDAC4-201ENST00000345617 KLK11Q9UBX7 282 aa17.46■□□□□ 0.38
HDAC4-201ENST00000345617 LNP1A1A4G5 178 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 ANKLE1Q8NAG6 615 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 MS4A6EQ96DS6 147 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 PPT2Q9UMR5 302 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 ALOX12BO75342 701 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 OPN1LWP04000 364 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 RPS4Y1P22090 263 aaKnown RBP17.45■□□□□ 0.38
HDAC4-201ENST00000345617 SLC38A11Q08AI6 406 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 HLA-GP17693 338 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 OR4A47Q6IF82 309 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 FAAP20Q6NZ36 180 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 OR4A4PQ8NGN8 299 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 GREB1Q4ZG55 1949 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 BCL3P20749 454 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 LGALSLQ3ZCW2 172 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF121P58317 390 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-201ENST00000345617 PIAS2O75928 621 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 SLC19A1P41440 591 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 FOXO1Q12778 655 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 TCTN3Q6NUS6 607 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 JMJD6Q6NYC1 403 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-201ENST00000345617 ALKAL1Q6UXT8 129 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 PLSCR3Q9NRY6 295 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 MIOXQ9UGB7 285 aa17.45■□□□□ 0.38
HDAC4-201ENST00000345617 TBX19O60806 448 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 ACSM5Q6NUN0 579 aa17.44■□□□□ 0.38
HDAC4-201ENST00000345617 GMPPAQ96IJ6 420 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-201ENST00000345617 MAGT1Q9H0U3 335 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms