RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 A0A087WUJ7 227 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 IGHV2-70P01814 119 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 ADRA2AP08913 450 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 NCBP2P52298 156 aaKnown RBP eCLIP3.19□□□□□ -1.9
SYNE1-201ENST00000341594 RHOBP62745 196 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 BHLHA15Q7RTS1 189 aaPredicted RBP3.19□□□□□ -1.9
SYNE1-201ENST00000341594 CD180Q99467 661 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 KATNB1Q9BVA0 655 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 POLR1DQ9Y2S0 133 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 C19orf67A6NJJ6 358 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 RPL7P18124 248 aaKnown RBP3.19□□□□□ -1.9
SYNE1-201ENST00000341594 GABRB1P18505 474 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 CKS1BP61024 79 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 B4GALNT1Q00973 533 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 SYPL1Q16563 259 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 MIDNQ504T8 468 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 SLC22A12Q96S37 553 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 SPIN2AQ99865 258 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 SPIN2BQ9BPZ2 258 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 LRIT1Q9P2V4 623 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 GRHPRQ9UBQ7 328 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 A0A1W2PPC4 97 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 ACTL6BO94805 426 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 F13BP05160 661 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 PAFAH1B2P68402 229 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF415Q09FC8 603 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 CMTM4Q8IZR5 234 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 OR5P2Q8WZ92 322 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 GABRA1P14867 456 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 GOLGA7Q7Z5G4 137 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 GNPNAT1Q96EK6 184 aaPredicted RBP3.19□□□□□ -1.9
SYNE1-201ENST00000341594 SLC35B3Q9H1N7 401 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 ANKRD10Q9NXR5 420 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 AK3Q9UIJ7 227 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 PIAS3Q9Y6X2 628 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 CATP04040 527 aaKnown RBP3.19□□□□□ -1.9
SYNE1-201ENST00000341594 TFF2Q03403 129 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 PSG3Q16557 428 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 PGBD5Q8N414 524 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM208Q9BTX3 173 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 TRAPPC2LQ9UL33 140 aa3.19□□□□□ -1.9
SYNE1-201ENST00000341594 IGLON5A6NGN9 336 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 PMCHP20382 165 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF266Q14584 549 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF391Q9UJN7 358 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TRAV27A0A087WT01 109 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 HS3ST1O14792 307 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TUSC2O75896 110 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 DCTDP32321 178 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 HINT1P49773 126 aaPredicted RBP3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF585AQ6P3V2 769 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 KCNK6Q9Y257 313 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 HEBP2Q9Y5Z4 205 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
SYNE1-201ENST00000341594 CXCL3P19876 107 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TPPP2P59282 170 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 SLC10A1Q14973 349 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 GGNBP1Q5YKI7 109 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 CLEC5AQ9NY25 188 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 C17orf51A8MQB3 221 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 SEMA4FO95754 770 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 IAPPP10997 89 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 Q6ZN92 141 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 AKR1E2Q96JD6 320 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 LCN2P80188 198 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 CDPF1Q6NVV7 123 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OR10W1Q8NGF6 305 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OR5D18Q8NGL1 313 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 NUBPLQ8TB37 319 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ANAPC13Q9BS18 74 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OR52A4PA6NMU1 304 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 PSMB6P28072 239 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 GPR6P46095 362 aaPredicted RBP3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TRA2AQ13595 282 aaKnown RBP eCLIP3.18□□□□□ -1.9
SYNE1-201ENST00000341594 MS4A10Q96PG2 267 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OR1A2Q9Y585 309 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 HPP00738 406 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ACP5P13686 325 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 MDGA1Q8NFP4 955 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 P2RX4Q99571 388 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 PTRH2Q9Y3E5 179 aaKnown RBP3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM225Q6GV28 225 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 BAP18Q8IXM2 172 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 LYPD6BQ8NI32 183 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ZDHHC3Q9NYG2 299 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 COL4A6Q14031 1691 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 A0A1B0GTI1 187 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 CD37P11049 281 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 KRTDAPP60985 99 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 LINC00346Q8IVM7 164 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 SLC25A31Q9H0C2 315 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 LOC102723971A0A1B0GUV8 181 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 J3QR06 171 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 CRYBA1P05813 215 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 TGIF2LYQ8IUE0 185 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ACER3Q9NUN7 267 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ERVH48-1M5A8F1 160 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OPRM1P35372 400 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF841Q6ZN19 808 aa3.18□□□□□ -1.9
SYNE1-201ENST00000341594 OR52I2Q8NH67 350 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms