RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CLDN6P56747 220 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 SUPT4H1P63272 117 aaKnown RBP16.52■□□□□ 0.24
PSPC1-201ENST00000338910 ANKRD55Q3KP44 614 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 POC1AQ8NBT0 407 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 TCTEX1D2Q8WW35 142 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 ISOC2Q96AB3 205 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 TMEM41AQ96HV5 264 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 PAPOLGQ9BWT3 736 aaKnown RBP16.52■□□□□ 0.24
PSPC1-201ENST00000338910 CHST11Q9NPF2 352 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 LOC102723996A0A087X1L8 192 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 IGHV1-45A0A0A0MS14 117 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 A0A1W2PPH5 198 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 LIPT2A6NK58 231 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 C9J4A7 227 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 NQO2P16083 231 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 HSF1Q00613 529 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 GLO1Q04760 184 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 MYBPHQ13203 477 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 PLA2G2CQ5R387 149 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 Q6ZRG5 221 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 MRGPRX4Q96LA9 322 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 C2orf50Q96LR7 162 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 IP6K3Q96PC2 410 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 EMC6Q9BV81 110 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 OR52A1Q9UKL2 312 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 MED12Q93074 2177 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 WRBO00258 174 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 BPNT1O95861 308 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 PET100P0DJ07 73 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 CRABP1P29762 137 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 NPY4RP50391 375 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 ZP4Q12836 540 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 WDSUB1Q8N9V3 476 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 ASB10Q8WXI3 467 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 RSRP1Q9BUV0 290 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 HS3ST3B1Q9Y662 390 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 CPAMD8Q8IZJ3 1885 aa16.51■□□□□ 0.23
PSPC1-201ENST00000338910 PPIHO43447 177 aaKnown RBP16.5■□□□□ 0.23
PSPC1-201ENST00000338910 SCGNO76038 276 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 DKK1O94907 266 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 SNRNP70P08621 437 aaKnown RBP16.5■□□□□ 0.23
PSPC1-201ENST00000338910 GSK3AP49840 483 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 KRBOX4Q5JUW0 171 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 VAX1Q5SQQ9 334 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 OR2M3Q8NG83 312 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 OR52N4Q8NGI2 321 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 NUDT16L1Q9BRJ7 211 aaKnown RBP16.5■□□□□ 0.23
PSPC1-201ENST00000338910 STARD10Q9Y365 291 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 CHCHD2Q9Y6H1 151 aaPredicted RBP16.5■□□□□ 0.23
PSPC1-201ENST00000338910 IGKV1D-43A0A0B4J1Z2 117 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 A0A1W2PNR3 127 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 hCG_1809904A0A1W2PP81 198 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 A0A1W2PR64 198 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 A0A1W2PRV1 198 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 AP4M1O00189 453 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 COX6A1P12074 109 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 ADH6P28332 368 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 LAP3P28838 519 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 HSD11B1P28845 292 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 ARRDC1Q8N5I2 433 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 IMMP1LQ96LU5 166 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 ANAPC10Q9UM13 185 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 KNTC1P50748 2209 aa16.5■□□□□ 0.23
PSPC1-201ENST00000338910 LOC101059948A0A1B0GTJ6 334 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 A6NIZ1 184 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 CST4P01036 141 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 CYC1P08574 325 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 HKR1P10072 659 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 DAP3P51398 398 aaKnown RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 RAP1BP61224 184 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 RAP1AP62834 184 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 ANGPTL5Q86XS5 388 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 MALSU1Q96EH3 234 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 TMPRSS5Q9H3S3 457 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 SERINC1Q9NRX5 453 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 COL27A1Q8IZC6 1860 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 IGLV3-32A0A0A0MS00 114 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 ETV2O00321 342 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 PI3P19957 117 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 PEG10Q86TG7 708 aaKnown RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 OR2Y1Q8NGV0 311 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 RTBDNQ9BSG5 229 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 METTL8Q9H825 291 aaKnown RBP16.49■□□□□ 0.23
PSPC1-201ENST00000338910 LOXL2Q9Y4K0 774 aa16.49■□□□□ 0.23
PSPC1-201ENST00000338910 ZNF729A6NN14 1252 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-201ENST00000338910 B4E171 279 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 P2RY10O00398 339 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 TP53I11O14683 189 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 SFTPDP35247 375 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 TSPAN7P41732 249 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 BIDP55957 195 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 SLC25A53Q5H9E4 307 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 DCAF12Q5T6F0 453 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 LINC00346Q8IVM7 164 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 SLC22A24Q8N4F4 322 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 FGGYQ96C11 551 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 KCNK17Q96T54 332 aa16.48■□□□□ 0.23
PSPC1-201ENST00000338910 NICN1Q9BSH3 213 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms