RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 PTX4Q96A99 478 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 WDR89Q96FK6 387 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 POM121L2Q96KW2 1035 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ROS1P08922 2347 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ZNF816-ZNF321PA0A0X1KG74 233 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 C7orf66A4D0T2 115 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 FAM172BPA6NC97 362 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 SDCBPO00560 298 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 TSC22D2O75157 780 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 SFTPBP07988 381 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 WNT5AP41221 380 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 CAPZA1P52907 286 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 RPS27AP62979 156 aaKnown RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 DNM1P46Q6ZS02 220 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 OR51F2Q8NH61 342 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 PLEKHJ1Q9NW61 149 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 KCNN3Q9UGI6 736 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ZNF175Q9Y473 711 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 NCOR2Q9Y618 2525 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ATRXP46100 2492 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 IGKV1-12A0A0C4DH73 117 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 CEACAM4O75871 244 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 IGKV1D-12P01611 117 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 KIR2DL2P43627 348 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 PRDX4Q13162 271 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 SF3B4Q15427 424 aaKnown RBP eCLIP8.72□□□□□ -1.016e-7■■□□□ 13.4
ARHGEF3-202ENST00000338458 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 RBMXL3Q8N7X1 1067 aaKnown RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 GRPEL2Q8TAA5 225 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 APOBEC3DQ96AK3 386 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ACTR6Q9GZN1 396 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 METTL9Q9H1A3 318 aa8.72□□□□□ -1.01
ARHGEF3-202ENST00000338458 ESPL1Q14674 2120 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 AQP7O14520 342 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 IFNA6P05013 189 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 SERPINA5P05154 406 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 CHRM2P08172 466 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 TRAPPC2P0DI81 140 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 TRAPPC2BP0DI82 140 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 NAT2P11245 290 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 DUSP1P28562 367 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 HAAOP46952 286 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 NPBWR2P48146 333 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 OR2W3Q7Z3T1 314 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 FBXL14Q8N1E6 418 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 SCPEP1Q9HB40 452 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 MGAT4CQ9UBM8 478 aa8.71□□□□□ -1.01
ARHGEF3-202ENST00000338458 A0A0A6YYH2 397 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 A6NJ64 397 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 HSPB6O14558 160 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 GEMIN2O14893 280 aaKnown RBP8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 AKR7A2O43488 359 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 PRKACBP22694 351 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ATP1B3P54709 279 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 TSPAN5P62079 268 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 KRTAP27-1Q3LI81 207 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ACSF3Q4G176 576 aaPredicted RBP8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 SPACA3Q8IXA5 215 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ZNF610Q8N9Z0 462 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 TMEM229BQ8NBD8 167 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 OR4K15Q8NH41 348 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 CA10Q9NS85 328 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 FZR1Q9UM11 496 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 PLEKHA6Q9Y2H5 1048 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 SS18L1O75177 396 aaPredicted RBP8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 PI3P19957 117 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 OPRM1P35372 400 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ZP1P60852 638 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 TGFBR3Q03167 851 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 NRN1LQ496H8 165 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 LIN54Q6MZP7 749 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ZNF611Q8N823 705 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 FBXW5Q969U6 566 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 SLAMF9Q96A28 289 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 SPSB1Q96BD6 273 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 ZNF488Q96MN9 340 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 PECRQ9BY49 303 aa8.71□□□□□ -1.02
ARHGEF3-202ENST00000338458 UBE2QL1A1L167 161 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 SULT1C2O00338 296 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 UBBP0CG47 229 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 CA6P23280 308 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 OR8B8Q15620 311 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 Q5BKY6 102 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 GLDNQ6ZMI3 551 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 CISD2Q8N5K1 135 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 SNAPC3Q92966 411 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 TMEM246Q9BRR3 403 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 RGCCQ9H4X1 137 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 EIF3KQ9UBQ5 218 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 TMEM82A0PJX8 343 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 ZNF732B4DXR9 585 aa8.7□□□□□ -1.02
ARHGEF3-202ENST00000338458 MKRN2OSH3BPM6 223 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms