RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 OR10Z1Q8NGY1 313 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 TRMT10AQ8TBZ6 339 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 NPRL2Q8WTW4 380 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 TMEM203Q969S6 136 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 OPALINQ96PE5 141 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 BPESC1Q9GZL8 116 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 TLNRD1Q9H1K6 362 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 PPIAL4AQ9Y536 164 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 ARID1AO14497 2285 aa10.04□□□□□ -0.8
SPTLC1-202ENST00000337841 ANKRD17O75179 2603 aaKnown RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 IGKV1-9A0A0C4DH69 117 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 TRIM64BA6NI03 449 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 SULT1B1O43704 296 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 GPX5O75715 221 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 FSTL3O95633 263 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 CYB5AP00167 134 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 HEXAP06865 529 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 HCKP08631 526 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 AZGP1P25311 298 aaKnown RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 HAAOP46952 286 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 DOC2BQ14184 412 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 KCNJ8Q15842 424 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 HAGHLQ6PII5 290 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 CEACAM19Q7Z692 300 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 LRRC28Q86X40 367 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 ANGPTL5Q86XS5 388 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 OR13C5Q8NGS8 318 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 LRRC29Q8WV35 223 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 PHYHIPQ92561 330 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 CPNE2Q96FN4 548 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 OR14A2Q96R54 314 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 FGF23Q9GZV9 251 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 TMEM138Q9NPI0 162 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 FOXJ3Q9UPW0 622 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 POLDIP2Q9Y2S7 368 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 WIPI2Q9Y4P8 454 aa10.03□□□□□ -0.8
SPTLC1-202ENST00000337841 TRBV5-7A0A0A0MS05 114 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 TRAV38-1A0A0B4J264 116 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 A0A1W2PPK0 400 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 ISPDA4D126 451 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 H7C1Q1 480 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 J3QT63 122 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 LGALS8O00214 317 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 CCRL2O00421 344 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 INMTO95050 263 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 LHBP01229 141 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 ALDOBP05062 364 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 GABRA5P31644 462 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 MDH2P40926 338 aaKnown RBP10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 BTG1P62324 171 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 NEDD8Q15843 81 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 AVPI1Q5T686 147 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 WDR82Q6UXN9 313 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 SATL1Q86VE3 508 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 MKXQ8IYA7 352 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 MUC20Q8N307 709 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 AQP3Q92482 292 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 DERL3Q96Q80 235 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 PKIBQ9C010 78 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 SLITRK2Q9H156 845 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 TMEM165Q9HC07 324 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 TCF7L1Q9HCS4 588 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 NOX4Q9NPH5 578 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 RASL12Q9NYN1 266 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 TAS2R4Q9NYW5 299 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 PCDHB10Q9UN67 800 aa10.02□□□□□ -0.81
SPTLC1-202ENST00000337841 NBPF19A0A087WUL8 3843 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 NDUFA2O43678 99 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 ARL6IP5O75915 188 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 RGS9O75916 674 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 ACAA1P09110 424 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 CD99P14209 185 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 CPT2P23786 658 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 BDKRB2P30411 391 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 RPS25P62851 125 aaKnown RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 IL24Q13007 206 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 MICBQ29980 383 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 HSD17B12Q53GQ0 312 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 SYT6Q5T7P8 510 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF529Q6P280 563 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 GCSAMQ8N6F7 178 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 DEFB108BQ8NET1 73 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 GPER1Q99527 375 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 GAL3ST1Q99999 423 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 METTL17Q9H7H0 456 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 SF3B6Q9Y3B4 125 aaKnown RBP10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 CCDC168Q8NDH2 2452 aa10.01□□□□□ -0.81
SPTLC1-202ENST00000337841 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 OOEPA6NGQ2 149 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms