RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CD36P16671 472 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 FSTP19883 344 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 HAAOP46952 286 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 RBP2P50120 134 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 ATP1B3P54709 279 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 MTCP1P56278 107 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 DSCR9P59020 149 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 HSD17B12Q53GQ0 312 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 HAGHLQ6PII5 290 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 PRSS57Q6UWY2 283 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 ANGPTL5Q86XS5 388 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF573Q86YE8 665 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 SCCPDHQ8NBX0 429 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR51A2Q8NGJ7 313 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 Q8TCH9 128 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 FAM168AQ92567 244 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 TLNRD1Q9H1K6 362 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 PPIL3Q9H2H8 161 aaKnown RBP11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 ARID1AO14497 2285 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 PPIHO43447 177 aaKnown RBP11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 GPX5O75715 221 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 UCHL1P09936 223 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 BDKRB2P30411 391 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF181Q2M3W8 571 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 HPS1Q92902 700 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 RFT1Q96AA3 541 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 SPACA5Q96QH8 159 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 TCF7L1Q9HCS4 588 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 FOXJ3Q9UPW0 622 aa11.87□□□□□ -0.51
APOBEC3B-202ENST00000335760 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 CLDN25C9JDP6 229 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 J3QT63 122 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 ARL6IP5O75915 188 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 PLATP00750 562 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 MAS1P04201 325 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 GADD45AP24522 165 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 GPR6P46095 362 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 TMEM33P57088 247 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 RIN1Q13671 783 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 RNF144BQ7Z419 303 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 SATL1Q86VE3 508 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 CALHM1Q8IU99 346 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 C1orf87Q8N0U7 546 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 LRRC29Q8WV35 223 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 AQP3Q92482 292 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 YIPF6Q96EC8 236 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 Q96MF0 132 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 PIMREGQ9BSJ6 248 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 METTL17Q9H7H0 456 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 EXOSC4Q9NPD3 245 aaKnown RBP11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 TMEM138Q9NPI0 162 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 STUB1Q9UNE7 303 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
APOBEC3B-202ENST00000335760 IGHV4-30-2A0A087WSY4 118 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 NDUFS8O00217 210 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 SYNGR1O43759 233 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 RHBDL1O75783 438 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 ALDOBP05062 364 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 TFAP2AP05549 437 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 SRMP19623 302 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 GALP22466 123 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 GIFP27352 417 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 POU3F4P49335 361 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 KISS1Q15726 138 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 AVPI1Q5T686 147 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 C22orf42Q6IC83 251 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 PEG10Q86TG7 708 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF671Q8TAW3 534 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 RAB1CQ92928 201 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 TMIGD2Q96BF3 282 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 GPER1Q99527 375 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 CHCHD6Q9BRQ6 235 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 PKIBQ9C010 78 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 SLITRK2Q9H156 845 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 POLDIP2Q9Y2S7 368 aa11.85□□□□□ -0.51
APOBEC3B-202ENST00000335760 LOC100506127A0A0U1RQW1 187 aa11.84□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF205O95201 554 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms