RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 A0A1W2PPC1 479 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 TMEM235A6NFC5 223 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 ADAP1O75689 374 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 CCL4P13236 92 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 FOSL2P15408 326 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 HIST1H1BP16401 226 aaKnown RBP12.25□□□□□ -0.45
SF1-202ENST00000334944 RELQ04864 619 aaPredicted RBP12.25□□□□□ -0.45
SF1-202ENST00000334944 TMEM176BQ3YBM2 270 aaPredicted RBP12.25□□□□□ -0.45
SF1-202ENST00000334944 ZNF343Q6P1L6 599 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 TMEM104Q8NE00 496 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 OIT3Q8WWZ8 545 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
SF1-202ENST00000334944 KLHL13Q9P2N7 655 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 B3GAT1Q9P2W7 334 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 UPB1Q9UBR1 384 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 R4GMQ9 66 aa12.25□□□□□ -0.45
SF1-202ENST00000334944 IGHV3-15A0A0B4J1V0 119 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 NME2P1O60361 137 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 OR13C7P0DN81 318 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 CEBPGP53567 150 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 CARFQ8N187 725 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 GVQW1Q8N7I0 195 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 SAP25Q8TEE9 199 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 DDIT4LQ96D03 193 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 DEFB126Q9BYW3 111 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 HHLA2Q9UM44 414 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 TIMM10BQ9Y5J6 103 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 IGLV3-12A0A075B6K2 115 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 F8VVB4 439 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 F8VWA3 439 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 PHOX2AO14813 284 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 CD5P06127 495 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 FCGR3AP08637 254 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 FABP4P15090 132 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 APOBEC1P41238 236 aaKnown RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 PLPPR5Q32ZL2 321 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 ST8SIA1Q92185 356 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 SEH1LQ96EE3 360 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 RASL10BQ96S79 203 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 ZNF736B4DX44 427 aaPredicted RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 CRHP06850 196 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 PI3P19957 117 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 PTGDSP41222 190 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 DAP3P51398 398 aaKnown RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 OR10S1Q8NGN2 331 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 SLAMF6Q96DU3 332 aa12.24□□□□□ -0.45
SF1-202ENST00000334944 ADAT3Q96EY9 351 aaPredicted RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 THOC3Q96J01 351 aaKnown RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 EIF5A2Q9GZV4 153 aaKnown RBP12.24□□□□□ -0.45
SF1-202ENST00000334944 PUS1Q9Y606 427 aaKnown RBP eCLIP12.24□□□□□ -0.45
SF1-202ENST00000334944 NCOA6Q14686 2063 aaPredicted RBP12.23□□□□□ -0.45
SF1-202ENST00000334944 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
SF1-202ENST00000334944 MFNGO00587 321 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 SOD3P08294 240 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 FHITP49789 147 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 ZNF674Q2M3X9 581 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 FDX2Q6P4F2 183 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 OR52N4Q8NGI2 321 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 CLDN23Q96B33 292 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 GNRHR2Q96P88 292 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 GSKIPQ9P0R6 139 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 WIF1Q9Y5W5 379 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
SF1-202ENST00000334944 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 FAM157AC9JC47 383 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 RER1O15258 196 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 ZFAND5O76080 213 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 CYB5AP00167 134 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 IFNA17P01571 189 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 ZBTB25P24278 435 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 CLRN1P58418 232 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 ZNF385CQ66K41 422 aaPredicted RBP12.23□□□□□ -0.45
SF1-202ENST00000334944 MYO7BQ6PIF6 2116 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 DNM1P46Q6ZS02 220 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 LYG2Q86SG7 212 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 NAXEQ8NCW5 288 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 EXPH5Q8NEV8 1989 aa12.23□□□□□ -0.45
SF1-202ENST00000334944 SRSF10O75494 262 aaKnown RBP12.22□□□□□ -0.45
SF1-202ENST00000334944 IGHMP01871 453 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 ZNF735P0CB33 412 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 TAS2R19P59542 299 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 ZNF616Q08AN1 781 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 SLC9A3R2Q15599 337 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 ZNF239Q16600 458 aaKnown RBP12.22□□□□□ -0.45
SF1-202ENST00000334944 C4orf17Q53FE4 359 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 CHST4Q8NCG5 386 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 OR51E1Q8TCB6 317 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 CNTD2Q9H8S5 307 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 C5orf63A6NC05 138 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 A6NIZ1 184 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 EDN3P14138 238 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 S100A10P60903 97 aa12.22□□□□□ -0.45
SF1-202ENST00000334944 RAP1BP61224 184 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms