RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CPEB2Q7Z5Q1 589 aaKnown RBP10.79□□□□□ -0.68
VPS33B-201ENST00000333371 WDR5BQ86VZ2 330 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 OR5T2Q8NGG2 359 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 OR2AE1Q8NHA4 323 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 ADAMTS17Q8TE56 1095 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 AQP10Q96PS8 301 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 CMSS1Q9BQ75 279 aaKnown RBP10.79□□□□□ -0.68
VPS33B-201ENST00000333371 NRIP2Q9BQI9 281 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 U3KQA8 63 aa10.79□□□□□ -0.68
VPS33B-201ENST00000333371 FOXI3A8MTJ6 420 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SCGB1D2O95969 90 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 HKR1P10072 659 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 ZNF708P17019 499 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 CCL1P22362 96 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 HOXA6P31267 233 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 OPRM1P35372 400 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 CHAF1BQ13112 559 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 IL15RAQ13261 267 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 IAH1Q2TAA2 248 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SP6Q3SY56 376 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 PPP1R3BQ86XI6 285 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 FAM89BQ8N5H3 189 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SEMA6DQ8NFY4 1073 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 RNF138Q8WVD3 245 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 BSCL2Q96G97 398 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SPSB2Q99619 263 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 ZNF2Q9BSG1 426 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 TAF9BQ9HBM6 251 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 ZNF175Q9Y473 711 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 ZNF407Q9C0G0 2248 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SPRY1O43609 319 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 SNAI3Q3KNW1 292 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 ACTBL2Q562R1 376 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 DHRS7BQ6IAN0 325 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 DEFB123Q8N688 67 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 MRPL24Q96A35 216 aaKnown RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 GNRHR2Q96P88 292 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 RBM24Q9BX46 236 aaKnown RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 GPR173Q9NS66 373 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
VPS33B-201ENST00000333371 KIAA1549Q9HCM3 1950 aa10.78□□□□□ -0.68
VPS33B-201ENST00000333371 FAM221AA4D161 298 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 ZFAND5O76080 213 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 SPP1P10451 314 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 LYL1P12980 280 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 CD80P33681 288 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 KCNJ3P48549 501 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 STK11Q15831 433 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 TSPO2Q5TGU0 170 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 IFI44Q8TCB0 444 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 RXFP4Q8TDU9 374 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 RCC2Q9P258 522 aaKnown RBP10.77□□□□□ -0.68
VPS33B-201ENST00000333371 FREM1Q5H8C1 2179 aa10.77□□□□□ -0.68
VPS33B-201ENST00000333371 MED19A0JLT2 244 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-201ENST00000333371 AQP7P3A6NL99 342 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 CRYBA1P05813 215 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 NAT2P11245 290 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 ECH1Q13011 328 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 PDZK1IP1Q13113 114 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 ENDOGQ14249 297 aaKnown RBP10.77□□□□□ -0.69
VPS33B-201ENST00000333371 SHEQ5VZ18 495 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 BATF2Q8N1L9 274 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 SPACA9Q96E40 222 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-201ENST00000333371 NECAB3Q96P71 396 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-201ENST00000333371 FAAP24Q9BTP7 215 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 DEFB126Q9BYW3 111 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 PISDQ9UG56 409 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 NCKAP5O14513 1909 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 YKT6O15498 198 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 OR8U9P0C7N5 309 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 PRF1P14222 555 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 MSX1P28360 303 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 PDCD1Q15116 288 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 TAF9Q16594 264 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 ZNF528Q3MIS6 628 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 RAB11FIP2Q7L804 512 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 OR5L2Q8NGL0 311 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 OR8U1Q8NH10 309 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 TOMM40LQ969M1 308 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 JSRP1Q96MG2 331 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-201ENST00000333371 DOCK7Q96N67 2140 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 S100A13Q99584 98 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 FBXL17Q9UF56 701 aa10.77□□□□□ -0.69
VPS33B-201ENST00000333371 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 MEX3AA1L020 520 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 RNASEK-C17orf49H0YIS7 233 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms