RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CAPZBP47756 277 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 SLC35A1P78382 337 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 ZP4Q12836 540 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 SURF2Q15527 256 aaPredicted RBP12.71□□□□□ -0.38
SNX20-202ENST00000330943 TMEM156Q8N614 296 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 RLN3Q8WXF3 142 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 GNRHR2Q96P88 292 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 PECRQ9BY49 303 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 SLC35B3Q9H1N7 401 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 WFDC1Q9HC57 220 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 CHST11Q9NPF2 352 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 MMACHCQ9Y4U1 282 aa12.71□□□□□ -0.38
SNX20-202ENST00000330943 PUS1Q9Y606 427 aaKnown RBP eCLIP12.71□□□□□ -0.38
SNX20-202ENST00000330943 IGKV3D-11A0A0A0MRZ8 115 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 BORCS7-ASMTA0A0B4J1R7 106 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 OR2C1O95371 312 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 DIRAS3O95661 229 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 SEC11BP0C7V7 166 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 HTR5AP47898 357 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
SNX20-202ENST00000330943 NSDHLQ15738 373 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNX20-202ENST00000330943 DMRT1Q9Y5R6 373 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 IGKV1-9A0A0C4DH69 117 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 SHISA8B8ZZ34 492 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 THEGLP0DJG4 465 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 RPS10P46783 165 aaKnown RBP12.7□□□□□ -0.38
SNX20-202ENST00000330943 RPS23P62266 143 aaKnown RBP12.7□□□□□ -0.38
SNX20-202ENST00000330943 FZD2Q14332 565 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
SNX20-202ENST00000330943 TMEM234Q8WY98 164 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
SNX20-202ENST00000330943 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 HS3ST3A1Q9Y663 406 aa12.7□□□□□ -0.38
SNX20-202ENST00000330943 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 SEMA4FO95754 770 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
SNX20-202ENST00000330943 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
SNX20-202ENST00000330943 UCP2P55851 309 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 FAM57BQ71RH2 274 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 SHDQ96IW2 340 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 PBDC1Q9BVG4 233 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 ELL3Q9HB65 397 aaPredicted RBP12.69□□□□□ -0.38
SNX20-202ENST00000330943 CUTCQ9NTM9 273 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 THADAQ6YHU6 1953 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 ZNF729A6NN14 1252 aaPredicted RBP12.69□□□□□ -0.38
SNX20-202ENST00000330943 DHRS7CA6NNS2 312 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 E5RGE8 158 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 ITGA3P26006 1051 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 ZNF84P51523 738 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 SP6Q3SY56 376 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 CLEC1BQ9P126 229 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 SUSD2Q9UGT4 822 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 NSG2Q9Y328 171 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
SNX20-202ENST00000330943 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 RER1O15258 196 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 KISS1Q15726 138 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 PYY3Q5JQD4 70 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 FAM213BQ8TBF2 198 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 HDHD3Q9BSH5 251 aaPredicted RBP12.68□□□□□ -0.38
SNX20-202ENST00000330943 SERINC1Q9NRX5 453 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 HDGFL3Q9Y3E1 203 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 ATG2AQ2TAZ0 1938 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 TCRBV21S2A2A0A5A6 115 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 STMND1H3BQB6 276 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CHATP28329 748 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 P2RY1P47900 373 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CLRN1P58418 232 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 RAB1AP62820 205 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 MFAP5Q13361 173 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CLINT1Q14677 625 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CARD17Q5XLA6 110 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 PLXDC2Q6UX71 529 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 HEPN1Q6WQI6 88 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 Q6ZS52 159 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 HIST2H3AQ71DI3 136 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 C6orf201Q7Z4U5 140 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 TOMM40LQ969M1 308 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 LIN37Q96GY3 246 aaPredicted RBP12.68□□□□□ -0.38
SNX20-202ENST00000330943 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 MCTS1Q9ULC4 181 aaKnown RBP12.68□□□□□ -0.38
SNX20-202ENST00000330943 PADI1Q9ULC6 663 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
SNX20-202ENST00000330943 SOHLH1Q5JUK2 328 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 CDPF1Q6NVV7 123 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 TMEM182Q6ZP80 229 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms