RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SRSF1Q07955 248 aaKnown RBP eCLIP16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 FAM189A2Q15884 450 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 RSBN1Q5VWQ0 802 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 SPSB1Q96BD6 273 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 POFUT1Q9H488 388 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 NEK6Q9HC98 313 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 TAS2R8Q9NYW2 309 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 KLK11Q9UBX7 282 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 MTFP1Q9UDX5 166 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 STARD10Q9Y365 291 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 hCG_38984A0A1B0GV85 526 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 ACKR3P25106 362 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 UNC119Q13432 240 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 KISS1Q15726 138 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 OR10K2Q6IF99 312 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 SSX8Q7RTT4 187 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 FAM46BQ96A09 425 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 APOBEC3DQ96AK3 386 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 UPRTQ96BW1 309 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 GPER1Q99527 375 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 NDRG3Q9UGV2 375 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 CADP27708 2225 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 SMPD2O60906 423 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 PTHLHP12272 177 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 PLA2G2AP14555 144 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 CD40P25942 277 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 PRSS12P56730 875 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 BTG1P62324 171 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 FAM3AP98173 230 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 OR8B8Q15620 311 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 ZBTB37Q5TC79 503 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 TMEM42Q69YG0 159 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 GLIPR1L1Q6UWM5 242 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 GLCCI1Q86VQ1 547 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 KCNG3Q8TAE7 436 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 CPNE2Q96FN4 548 aaPredicted RBP16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 C1orf147Q96MC9 270 aaPredicted RBP16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 SPACA5Q96QH8 159 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 SCPEP1Q9HB40 452 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 NUBP2Q9Y5Y2 271 aa16.11■□□□□ 0.17
EXOSC3-201ENST00000327304 WIPF3A6NGB9 483 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 C19orf84I3L1E1 186 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 ICMTO60725 284 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 TRAPPC2P0DI81 140 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 TRAPPC2BP0DI82 140 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 OR3A4PP47883 348 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 ZNF92Q03936 586 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 TNK1Q13470 666 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 CNN3Q15417 329 aaKnown RBP16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 OLFML2AQ68BL7 652 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 AKAP14Q86UN6 197 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 HRASLSQ9HDD0 168 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 EIF3KQ9UBQ5 218 aaKnown RBP16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 DPRXA6NFQ7 191 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 TUBAL3A6NHL2 446 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 INMT-MINDY4F8WBC2 141 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 CHRM2P08172 466 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 NAT2P11245 290 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 PRKACBP22694 351 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 CLVS2Q5SYC1 327 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 CRIP3Q6Q6R5 217 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 RNF144BQ7Z419 303 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 GPX8Q8TED1 209 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 HPS1Q92902 700 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 TECTBQ96PL2 329 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 CACNG6Q9BXT2 260 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 PTTG3PQ9NZH4 202 aa16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 MYEF2Q9P2K5 600 aaKnown RBP16.1■□□□□ 0.17
EXOSC3-201ENST00000327304 HEATR1Q9H583 2144 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 RAB27BO00194 218 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 CRYAAP02489 173 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 TCRBP04435 133 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 CSF1P09603 554 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 HLA-DMAP28067 261 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 PTGFRP43088 359 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 UCP2P55851 309 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 ERVS71-1P61550 626 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 BSPH1Q075Z2 132 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 CARTPTQ16568 116 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 SPATA46Q5T0L3 261 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 TMEM108Q6UXF1 575 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 CDH24Q86UP0 819 aa16.09■□□□□ 0.17
EXOSC3-201ENST00000327304 A0A0B4J293 547 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 ATP6V1G2-DDX39BF2Z307 99 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 BOLA2-SMG1P6H3BVE0 249 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 GMDSO60547 372 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 MT-ND4P03905 459 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 LPLP06858 475 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 GIFP27352 417 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 RAG2P55895 527 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 PPP1CBP62140 327 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 HLXQ14774 488 aaPredicted RBP16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 TATDN3Q17R31 274 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 CST11Q9H112 138 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 OPA3Q9H6K4 179 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 NGBQ9NPG2 151 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 GPR173Q9NS66 373 aa16.08■□□□□ 0.17
EXOSC3-201ENST00000327304 HMX3A6NHT5 357 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 CDC14BO60729 498 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 PTAFRP25105 342 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms