RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MSL2Q9HCI7 577 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 LRP5LA4QPB2 252 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 RGS5O15539 181 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 ARSBP15848 533 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 POU3F4P49335 361 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 ANGPTL5Q86XS5 388 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 LAX1Q8IWV1 398 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 SAMD12Q8N8I0 201 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 OR5D18Q8NGL1 313 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 C14orf119Q9NWQ9 140 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 NKIRAS2Q9NYR9 191 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 CISD1Q9NZ45 108 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 ADAM30Q9UKF2 790 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 ROS1P08922 2347 aa8.72□□□□□ -1.01
VIPAS39-201ENST00000327028 A6NNC1 897 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 LDLRAD4O15165 306 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 HPGDSO60760 199 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 ZNF81P51508 661 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 C2orf76Q3KRA6 126 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 UBE2NLQ5JXB2 153 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 GLIPR1L1Q6UWM5 242 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 ASCL4Q6XD76 172 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 OR2W3Q7Z3T1 314 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 WDR86Q86TI4 376 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 ZNF573Q86YE8 665 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 CMTM3Q96MX0 182 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 KCNK15Q9H427 330 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 FBLN5Q9UBX5 448 aa8.71□□□□□ -1.01
VIPAS39-201ENST00000327028 TMEM272A0A1B0GTI8 110 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 B9A039 149 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 F5H5P2 479 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM225BP0DP42 221 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 CD200P41217 278 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 HAAOP46952 286 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 QRFPP83859 136 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 PDZK1IP1Q13113 114 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM76BQ5HYJ3 339 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 LRRC28Q86X40 367 aaPredicted RBP8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 CALHM1Q8IU99 346 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 SAXO1Q8IYX7 474 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 ZSCAN4Q8NAM6 433 aaPredicted RBP8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 PXT1Q8NFP0 134 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 OR2Z1Q8NG97 314 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 ELMOD3Q96FG2 381 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 PKIBQ9C010 78 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 OR51I2Q9H344 312 aa8.71□□□□□ -1.02
VIPAS39-201ENST00000327028 J3QT63 122 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 SPRY1O43609 319 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 APOA1P02647 267 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ADH4P08319 380 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 RAB6AP20340 208 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 MPZP25189 248 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 C1QL2Q7Z5L3 287 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM200AQ86VY9 491 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF611Q8N823 705 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 FBXW5Q969U6 566 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 PTX4Q96A99 478 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 SLC25A38Q96DW6 304 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 CEP19Q96LK0 163 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 DIRC2Q96SL1 478 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 S100A13Q99584 98 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 TLNRD1Q9H1K6 362 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 IL36GQ9NZH8 169 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ZDHHC8Q9ULC8 765 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ABCA4P78363 2273 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 M0R233 179 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 HS3ST1O14792 307 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 PTBP3O95758 552 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 CLDN1O95832 211 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 PLATP00750 562 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 IGHV1-46P01743 117 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 EIF4EP06730 217 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ELK1P19419 428 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 TNFSF8P32971 234 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ETV6P41212 452 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 IL24Q13007 206 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 MST1LQ2TV78 715 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 HAGHLQ6PII5 290 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 SLC25A26Q70HW3 274 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 CCDC190Q86UF4 302 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 MKXQ8IYA7 352 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 FBXL14Q8N1E6 418 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 CELF2-AS1Q8N7Q2 184 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 METTL9Q9H1A3 318 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ABCG5Q9H222 651 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 AKIP1Q9NQ31 210 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 RHBDL2Q9NX52 303 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 ING4Q9UNL4 249 aa8.7□□□□□ -1.02
VIPAS39-201ENST00000327028 IGKV1-12A0A0C4DH73 117 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM14DPA8MWL7 114 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 SPRY3O43610 288 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ANGPTL7O43827 346 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 IGKV1D-12P01611 117 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 BMP4P12644 408 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 TNFSF4P23510 183 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ART1P52961 327 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms