RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ALX3O95076 343 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ALDOBP05062 364 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
PRPF3-201ENST00000324862 C1orf100Q5SVJ3 147 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ZNF826PQ6ZT77 177 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ACBD4Q8NC06 268 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 TMEM104Q8NE00 496 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
PRPF3-201ENST00000324862 SORCS2Q96PQ0 1159 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 TREM2Q9NZC2 230 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
PRPF3-201ENST00000324862 KLF2Q9Y5W3 355 aaPredicted RBP12.98□□□□□ -0.33
PRPF3-201ENST00000324862 PLSCR5A0PG75 271 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 A6NNC1 897 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 PRKACBP22694 351 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 PTGFRP43088 359 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 GMFBP60983 142 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ZNF154Q13106 437 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ZNF611Q8N823 705 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 OR6M1Q8NGM8 313 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ING4Q9UNL4 249 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 CSMD1Q96PZ7 3565 aa12.98□□□□□ -0.33
PRPF3-201ENST00000324862 ASH1LQ9NR48 2969 aaKnown RBP12.97□□□□□ -0.33
PRPF3-201ENST00000324862 CDIPTO14735 213 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 EIF4EP06730 217 aaKnown RBP12.97□□□□□ -0.33
PRPF3-201ENST00000324862 TMEM225BP0DP42 221 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 ARSBP15848 533 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
PRPF3-201ENST00000324862 NPBWR2P48146 333 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 ZNF81P51508 661 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 LHFPL2Q6ZUX7 228 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 MUC15Q8N387 334 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 OR5A2Q8NGI9 324 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 OR13G1Q8NGZ3 307 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 ELMOD3Q96FG2 381 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 BANF2Q9H503 90 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
PRPF3-201ENST00000324862 NEK6Q9HC98 313 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 TMEM272A0A1B0GTI8 110 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 IGHV1-46P01743 117 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 SOD3P08294 240 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 PSMD7P51665 324 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 ATP1B3P54709 279 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 SELENOVP59797 346 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 UNC119Q13432 240 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 RTN4RL2Q86UN3 420 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 OR6Q1Q8NGQ2 317 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 MMP27Q9H306 513 aa12.97□□□□□ -0.33
PRPF3-201ENST00000324862 FASNP49327 2511 aaKnown RBP12.96□□□□□ -0.33
PRPF3-201ENST00000324862 A0A075B6Q4 140 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 SFTPBP07988 381 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 VSIG8P0DPA2 414 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 ELK1P19419 428 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 GNG3P63215 75 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 CCL8P80075 99 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 PDZK1IP1Q13113 114 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-201ENST00000324862 AP3S1Q92572 193 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 OR51I2Q9H344 312 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.33
PRPF3-201ENST00000324862 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 SERPINA2P20848 420 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 TNFSF8P32971 234 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 PEX19P40855 299 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 HIST2H2BCQ6DN03 193 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 IZUMO1Q8IYV9 350 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 SCCPDHQ8NBX0 429 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 OR51F2Q8NH61 342 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 FOXRED1Q96CU9 486 aaPredicted RBP12.96□□□□□ -0.34
PRPF3-201ENST00000324862 MICU1Q9BPX6 476 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 RTL8AQ9BWD3 113 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.34
PRPF3-201ENST00000324862 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
PRPF3-201ENST00000324862 CROCCP3Q8IVE0 287 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 SEH1LQ96EE3 360 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 IL36RNQ9UBH0 155 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
PRPF3-201ENST00000324862 A0A1B0GWJ7 208 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 M0R233 179 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 KDM4BO94953 1096 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 CFPP27918 469 aa12.94□□□□□ -0.34
PRPF3-201ENST00000324862 SNU13P55769 128 aaKnown RBP12.94□□□□□ -0.34
PRPF3-201ENST00000324862 QRFPP83859 136 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms