RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TAF9BQ9HBM6 251 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 ZNF160Q9HCG1 818 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 OR2S2Q9NQN1 319 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 ZFP57Q9NU63 452 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 C1orf123Q9NWV4 160 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 MLXQ9UH92 298 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 TUBD1Q9UJT1 453 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 MCTS1Q9ULC4 181 aaKnown RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 CA14Q9ULX7 337 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 C14orf166Q9Y224 244 aaKnown RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 FAM96BQ9Y3D0 163 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CHCHD2Q9Y6H1 151 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 EML6Q6ZMW3 1958 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 A0A087WZY1 265 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 OR5H15A6NDH6 313 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CRYM-AS1A6NIL9 109 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 DHRS7CA6NNS2 312 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 FAM157AC9JC47 383 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CST4P01036 141 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CYC1P08574 325 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CD63P08962 238 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 FCGR2AP12318 317 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 RCC1P18754 421 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 SERPINA2P20848 420 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 RBMXP38159 391 aaKnown RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 CSNK1A1P48729 337 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 RAB13P51153 203 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 S100A10P60903 97 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 IAH1Q2TAA2 248 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 DMRTC1Q5HYR2 192 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 PHYHD1Q5SRE7 291 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 SHEQ5VZ18 495 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 FAM219AQ8IW50 185 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 TMEM123Q8N131 208 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 SEMA6DQ8NFY4 1073 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 LYPD6BQ8NI32 183 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 NTNG2Q96CW9 530 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CRB3Q9BUF7 120 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 DEFB126Q9BYW3 111 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 HRH4Q9H3N8 390 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 PARP11Q9NR21 331 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 GSKIPQ9P0R6 139 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 PCDHGA1Q9Y5H4 931 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 POMT1Q9Y6A1 747 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 RTTNQ86VV8 2226 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 MEX3AA1L020 520 aaKnown RBP7.61□□□□□ -1.19
CLK1-201ENST00000321356 RNASEK-C17orf49H0YIS7 233 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 FBXO24O75426 580 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 MED6O75586 246 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 DEDDO75618 318 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 KNG1P01042 644 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 SFTPBP07988 381 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 PNLIPP16233 465 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 PAX6P26367 422 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 RPL12P30050 165 aaKnown RBP7.61□□□□□ -1.19
CLK1-201ENST00000321356 OR2A2Q6IF42 318 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 LCN10Q6JVE6 187 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 RPUSD3Q6P087 351 aaKnown RBP7.61□□□□□ -1.19
CLK1-201ENST00000321356 C6orf201Q7Z4U5 140 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 PHF7Q9BWX1 381 aaPredicted RBP7.61□□□□□ -1.19
CLK1-201ENST00000321356 C19orf25Q9UFG5 118 aaPredicted RBP7.61□□□□□ -1.19
CLK1-201ENST00000321356 RARRES3Q9UL19 164 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 EDARQ9UNE0 448 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 PIGLQ9Y2B2 252 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 AMDHD2Q9Y303 409 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 KIAA1549Q9HCM3 1950 aa7.61□□□□□ -1.19
CLK1-201ENST00000321356 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF98A6NK75 572 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 F5H5K5 113 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 K7EPK0 472 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 M0R135 149 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 TP53I11O14683 189 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 DHHO43323 396 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 JTBO76095 146 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 VAMP5O95183 116 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 APOC1P02654 83 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SERPINA5P05154 406 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 NME2P22392 152 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 GUCA1AP43080 201 aaPredicted RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 SUCLG1P53597 346 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 MRPL14Q6P1L8 145 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 OPN5Q6U736 354 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SULF2Q8IWU5 870 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SGPP2Q8IWX5 399 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SKA3Q8IX90 412 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 FAM71E2Q8N5Q1 922 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 UBAC2Q8NBM4 344 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 FNDC9Q8TBE3 224 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 GLYATL2Q8WU03 294 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PIGTQ969N2 578 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF799Q96GE5 643 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF385AQ96PM9 386 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 S100A13Q99584 98 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PRRX2Q99811 253 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PIGQQ9BRB3 760 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF2Q9BSG1 426 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms