RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NRASP01111 189 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 CSTBP04080 98 aaKnown RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 TPOP07202 933 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 RRADP55042 308 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 PER3P56645 1201 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FAM3AP98173 230 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 KRTAP27-1Q3LI81 207 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 NRN1LQ496H8 165 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 TEX261Q6UWH6 196 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF767PQ75MW2 155 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF100Q8IYN0 542 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FAM109AQ8N4B1 249 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 C12orf45Q8N5I9 185 aaPredicted RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 BORCS8Q96FH0 119 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 DPCDQ9BVM2 203 aaPredicted RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 LINC00470Q9BZP3 86 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 BCO1Q9HAY6 547 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ACKR4Q9NPB9 350 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 U3KQ87 197 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 VSTM5A8MXK1 200 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 F5H5P2 479 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 H3BUI4 141 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 HTR3BO95264 441 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ACTL6AO96019 429 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 CD79AP11912 226 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 EDN3P14138 238 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 CPT2P23786 658 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 RBP2P50120 134 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PMP22Q01453 160 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 RSU1Q15404 277 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 CNN3Q15417 329 aaKnown RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 GRK1Q15835 563 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PNLIPRP3Q17RR3 467 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 NKAPLQ5M9Q1 402 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 CLVS2Q5SYC1 327 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 NUFIP2Q7Z417 695 aaKnown RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 C6orf201Q7Z4U5 140 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 MAFIPQ8WZ33 124 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PIGCQ92535 297 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 RGCCQ9H4X1 137 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 HEXA-AS1Q9H8Q6 139 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PLEKHJ1Q9NW61 149 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 B3GNT2Q9NY97 397 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZFHX4Q86UP3 3567 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 TRGV5A0A0B4J1U4 118 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 hCG_38984A0A1B0GV85 526 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 C5orf49A4QMS7 147 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZNF503-AS2A6NEH8 195 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZNF724A8MTY0 619 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 RPL36A-HNRNPH2H7BZ11 118 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 F12P00748 615 aaPredicted RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 AKR1C4P17516 323 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 TBPP20226 339 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 NFYAP23511 347 aaPredicted RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 CD82P27701 267 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 IL13RA1P78552 427 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 RNPS1Q15287 305 aaKnown RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 TAF9Q16594 264 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 MYO7BQ6PIF6 2116 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 TMEM178AQ8NBL3 297 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZNF680Q8NEM1 530 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 MARCH1Q8TCQ1 289 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ELMOD3Q96FG2 381 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 PECRQ9BY49 303 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 METTL9Q9H1A3 318 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZNF391Q9UJN7 358 aa6.57□□□□□ -1.36
IFT88-201ENST00000319980 NOP16Q9Y3C1 178 aaKnown RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 ZFHX2Q9C0A1 2572 aaPredicted RBP6.57□□□□□ -1.36
IFT88-201ENST00000319980 OR6C65A6NJZ3 312 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 SDCBPO00560 298 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 ARPC5O15511 151 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 MPC2O95563 127 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 AMY2BP19961 511 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 PRKACBP22694 351 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 TNFSF10P50591 281 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 SNU13P55769 128 aaKnown RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 RAB1AP62820 205 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 PPP1R1AQ13522 171 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ZMYND11Q15326 602 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 LIN54Q6MZP7 749 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 MOB3CQ70IA8 216 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 SLC25A42Q86VD7 318 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ADAD2Q8NCV1 583 aaKnown RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 FDCSPQ8NFU4 85 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 TERB2Q8NHR7 220 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 RADILQ96JH8 1075 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 TM2D1Q9BX74 207 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 C1QTNF5Q9BXJ0 243 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 FN3KRPQ9HA64 309 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ASCL3Q9NQ33 180 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ZNF701Q9NV72 531 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 SPRR3Q9UBC9 169 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 KIAA1549Q9HCM3 1950 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 FXYD6-FXYD2A0A087WZ82 144 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 FOXI3A8MTJ6 420 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 SERPINE3A8MV23 424 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms