RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 NRIP2Q9BQI9 281 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 ARPC4-TTLL3A0A0A6YYG9 625 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 SGCEO43556 437 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 NR2C1P13056 603 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 FOLR3P41439 243 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 CAV2P51636 162 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 EFNA3P52797 238 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 WDFY1Q8IWB7 410 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 OR9K2Q8NGE7 335 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 OR10S1Q8NGN2 331 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 HDHD3Q9BSH5 251 aaPredicted RBP9.27□□□□□ -0.93
COL3A1-202ENST00000317840 FBXL17Q9UF56 701 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 PADI1Q9ULC6 663 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 EYSQ5T1H1 3165 aa9.27□□□□□ -0.93
COL3A1-202ENST00000317840 CUL9Q8IWT3 2517 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR8U9P0C7N5 309 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR5H8P0DN80 308 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 HLA-GP17693 338 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
COL3A1-202ENST00000317840 PNLIPRP3Q17RR3 467 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 SLC25A24Q6NUK1 477 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 C1QL2Q7Z5L3 287 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 RXFP4Q8TDU9 374 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 SEC11CQ9BY50 192 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 STRADBQ9C0K7 418 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 FN3KRPQ9HA64 309 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 FAM212BQ9NTI7 297 aaPredicted RBP9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ZNF319Q9P2F9 582 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 TRANK1O15050 2925 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 RAMP1O60894 148 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 IGHMP01871 453 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 CCNOP22674 350 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OMGP23515 440 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 CFPP27918 469 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 LPAR6P43657 344 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 RRADP55042 308 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 TMEM33P57088 247 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 HERV-K104P61576 105 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 NAAAQ02083 359 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ARL6IP1Q15041 203 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ADAM5Q6NVV9 412 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 GJC3Q8NFK1 279 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR5L1Q8NGL2 311 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 KIRREL1Q96J84 757 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ULBP2Q9BZM5 246 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 A0A0A6YYD4 124 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR5H15A6NDH6 313 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 NUDT19A8MXV4 375 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 JTBO76095 146 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 GSK3AP49840 483 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 P2RY4P51582 365 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 F2RL1P55085 397 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 PIGPP57054 158 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 GRB2P62993 217 aaKnown RBP9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ZP4Q12836 540 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 TSPO2Q5TGU0 170 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 LINC00696Q6ZRV3 163 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR5AS1Q8N127 324 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 OR14L1PQ8NHC6 308 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ISOC2Q96AB3 205 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 BORCS8Q96FH0 119 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 SLC26A1Q9H2B4 701 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 ZNF442Q9H7R0 627 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 KCNJ16Q9NPI9 418 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 FBXO7Q9Y3I1 522 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 PCDHGA1Q9Y5H4 931 aa9.26□□□□□ -0.93
COL3A1-202ENST00000317840 A0A1W2PQM1 296 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 TXNL1O43396 289 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 SPRY1O43609 319 aaPredicted RBP9.25□□□□□ -0.93
COL3A1-202ENST00000317840 APOC1P02654 83 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 GLAP06280 429 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 DAOP14920 347 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 ASCL1P50553 236 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 PLGLB1Q02325 96 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 ECH1Q13011 328 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 PDCD1Q15116 288 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 FBXW12Q6X9E4 464 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 CPEB2Q7Z5Q1 589 aaKnown RBP9.25□□□□□ -0.93
COL3A1-202ENST00000317840 ANKRD37Q7Z713 158 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 SLC38A9Q8NBW4 561 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 OXGR1Q96P68 337 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 PRRX2Q99811 253 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 M0R135 149 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
COL3A1-202ENST00000317840 CELA2AP08217 269 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 DBHP09172 617 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 MSR1P21757 451 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 GLP1RP43220 463 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 ZNF84P51523 738 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 HFEQ30201 348 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 D2HGDHQ8N465 521 aa9.25□□□□□ -0.93
COL3A1-202ENST00000317840 SUMF1Q8NBK3 374 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms